Gene : Eucgr.H01473 E. grandis v2.0
Defline:  (1 of 1) PTHR20982:SF8 - RIBOSOME-RECYCLING FACTOR, CHLOROPLASTIC Genomic Order:  1140
Name:  ? Eucgr.H01473 Secondary Identifier:  ? PAC:32040873
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01473 0.5kb upstream 0.5kb upstream 6712 true Chr08: 16531883-16538594 Eucalyptus grandis
Eucgr.H01473 0.5kb upstream 0.5kb upstream 500 false Chr08: 16531883-16532382 Eucalyptus grandis
Eucgr.H01473 0.5kb downstream 0.5kb downstream 6712 true Chr08: 16532383-16539094 Eucalyptus grandis
Eucgr.H01473 0.5kb downstream 0.5kb downstream 500 false Chr08: 16538595-16539094 Eucalyptus grandis
Eucgr.H01473 1.0kb upstream 1.0kb upstream 7212 true Chr08: 16531383-16538594 Eucalyptus grandis
Eucgr.H01473 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16531383-16532382 Eucalyptus grandis
Eucgr.H01473 1.0kb downstream 1.0kb downstream 7212 true Chr08: 16532383-16539594 Eucalyptus grandis
Eucgr.H01473 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16538595-16539594 Eucalyptus grandis
Eucgr.H01473 2.0kb upstream 2.0kb upstream 8212 true Chr08: 16530383-16538594 Eucalyptus grandis
Eucgr.H01473 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16530383-16532382 Eucalyptus grandis
Eucgr.H01473 2.0kb downstream 2.0kb downstream 8212 true Chr08: 16532383-16540594 Eucalyptus grandis
Eucgr.H01473 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16538595-16540594 Eucalyptus grandis
Eucgr.H01473 5.0kb upstream 5.0kb upstream 11212 true Chr08: 16527383-16538594 Eucalyptus grandis
Eucgr.H01473 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16527383-16532382 Eucalyptus grandis
Eucgr.H01473 5.0kb downstream 5.0kb downstream 11212 true Chr08: 16532383-16543594 Eucalyptus grandis
Eucgr.H01473 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16538595-16543594 Eucalyptus grandis
Eucgr.H01473 10.0kb upstream 10.0kb upstream 16212 true Chr08: 16522383-16538594 Eucalyptus grandis
Eucgr.H01473 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16522383-16532382 Eucalyptus grandis
Eucgr.H01473 10.0kb downstream 10.0kb downstream 16212 true Chr08: 16532383-16548594 Eucalyptus grandis
Eucgr.H01473 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16538595-16548594 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070720 5270 Rosid View MSA
123738914 5271 Pentapetalae View MSA
122791882 5272 Eudicot View MSA
122047594 5273 Angiosperm View MSA
121347189 5274 Embryophyte View MSA
123426272 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6461 0.0 31.6199    
cufflinks 2.4557 0.0 6.93372    
cufflinks 6.21743 0.0 15.6684    
cufflinks 1.8359 0.0 5.53317   Low
cufflinks 6.91809 0.0 17.0786    
cufflinks 25.8983 0.0 58.3604   High

0 Strain