Gene : Eucgr.H01398 E. grandis v2.0
Defline:  (1 of 8) PTHR11802:SF96 - SERINE CARBOXYPEPTIDASE-LIKE 20-RELATED Genomic Order:  1202
Name:  ? Eucgr.H01398 Secondary Identifier:  ? PAC:32045283
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01398 0.5kb upstream 0.5kb upstream 4280 true Chr08: 17413500-17417779 Eucalyptus grandis
Eucgr.H01398 0.5kb upstream 0.5kb upstream 500 false Chr08: 17413500-17413999 Eucalyptus grandis
Eucgr.H01398 0.5kb downstream 0.5kb downstream 4280 true Chr08: 17414000-17418279 Eucalyptus grandis
Eucgr.H01398 0.5kb downstream 0.5kb downstream 500 false Chr08: 17417780-17418279 Eucalyptus grandis
Eucgr.H01398 1.0kb upstream 1.0kb upstream 4780 true Chr08: 17413000-17417779 Eucalyptus grandis
Eucgr.H01398 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17413000-17413999 Eucalyptus grandis
Eucgr.H01398 1.0kb downstream 1.0kb downstream 4780 true Chr08: 17414000-17418779 Eucalyptus grandis
Eucgr.H01398 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17417780-17418779 Eucalyptus grandis
Eucgr.H01398 2.0kb upstream 2.0kb upstream 5780 true Chr08: 17412000-17417779 Eucalyptus grandis
Eucgr.H01398 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17412000-17413999 Eucalyptus grandis
Eucgr.H01398 2.0kb downstream 2.0kb downstream 5780 true Chr08: 17414000-17419779 Eucalyptus grandis
Eucgr.H01398 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17417780-17419779 Eucalyptus grandis
Eucgr.H01398 5.0kb upstream 5.0kb upstream 8780 true Chr08: 17409000-17417779 Eucalyptus grandis
Eucgr.H01398 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17409000-17413999 Eucalyptus grandis
Eucgr.H01398 5.0kb downstream 5.0kb downstream 8780 true Chr08: 17414000-17422779 Eucalyptus grandis
Eucgr.H01398 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17417780-17422779 Eucalyptus grandis
Eucgr.H01398 10.0kb upstream 10.0kb upstream 13780 true Chr08: 17404000-17417779 Eucalyptus grandis
Eucgr.H01398 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17404000-17413999 Eucalyptus grandis
Eucgr.H01398 10.0kb downstream 10.0kb downstream 13780 true Chr08: 17414000-17427779 Eucalyptus grandis
Eucgr.H01398 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17417780-17427779 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075506 5270 Rosid View MSA
123752631 5271 Pentapetalae View MSA
122797203 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0773 0.0 25.6885   High
cufflinks 0.126303 0.0 0.480309 Low Low
cufflinks 5.28065 0.0 13.0681    
cufflinks 0.914178 0.0 2.69393    
cufflinks 2.11387 0.0 5.72795    
cufflinks 3.88524 0.0 10.0214    

0 Strain