Gene : Eucgr.H01386 E. grandis v2.0
Defline:  (1 of 1) PTHR12608:SF4 - GDT1-LIKE PROTEIN 3 Genomic Order:  1213
Name:  ? Eucgr.H01386 Secondary Identifier:  ? PAC:32044132
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01386 0.5kb upstream 0.5kb upstream 4782 true Chr08: 17495745-17500526 Eucalyptus grandis
Eucgr.H01386 0.5kb upstream 0.5kb upstream 500 false Chr08: 17500027-17500526 Eucalyptus grandis
Eucgr.H01386 0.5kb downstream 0.5kb downstream 4782 true Chr08: 17495245-17500026 Eucalyptus grandis
Eucgr.H01386 0.5kb downstream 0.5kb downstream 500 false Chr08: 17495245-17495744 Eucalyptus grandis
Eucgr.H01386 1.0kb upstream 1.0kb upstream 5282 true Chr08: 17495745-17501026 Eucalyptus grandis
Eucgr.H01386 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17500027-17501026 Eucalyptus grandis
Eucgr.H01386 1.0kb downstream 1.0kb downstream 5282 true Chr08: 17494745-17500026 Eucalyptus grandis
Eucgr.H01386 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17494745-17495744 Eucalyptus grandis
Eucgr.H01386 2.0kb upstream 2.0kb upstream 6282 true Chr08: 17495745-17502026 Eucalyptus grandis
Eucgr.H01386 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17500027-17502026 Eucalyptus grandis
Eucgr.H01386 2.0kb downstream 2.0kb downstream 6282 true Chr08: 17493745-17500026 Eucalyptus grandis
Eucgr.H01386 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17493745-17495744 Eucalyptus grandis
Eucgr.H01386 5.0kb upstream 5.0kb upstream 9282 true Chr08: 17495745-17505026 Eucalyptus grandis
Eucgr.H01386 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17500027-17505026 Eucalyptus grandis
Eucgr.H01386 5.0kb downstream 5.0kb downstream 9282 true Chr08: 17490745-17500026 Eucalyptus grandis
Eucgr.H01386 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17490745-17495744 Eucalyptus grandis
Eucgr.H01386 10.0kb upstream 10.0kb upstream 14282 true Chr08: 17495745-17510026 Eucalyptus grandis
Eucgr.H01386 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17500027-17510026 Eucalyptus grandis
Eucgr.H01386 10.0kb downstream 10.0kb downstream 14282 true Chr08: 17485745-17500026 Eucalyptus grandis
Eucgr.H01386 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17485745-17495744 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066638 5270 Rosid View MSA
123740452 5271 Pentapetalae View MSA
122788674 5272 Eudicot View MSA
122047998 5273 Angiosperm View MSA
121345967 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6849 0.0 66.4471    
cufflinks 44.1694 0.0 100.19 High  
cufflinks 29.5746 0.0 74.1981 High  
cufflinks 58.9633 0.0 151.51 High High
cufflinks 25.2815 0.0 56.8434    
cufflinks 27.3451 0.0 61.4273    

0 Strain