Gene : Eucgr.H01345 E. grandis v2.0
Defline:  (1 of 2) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  1248
Name:  ? Eucgr.H01345 Secondary Identifier:  ? PAC:32042916
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5188 Eucalyptus grandis pathologic  
Egrandis PWY-5918 Eucalyptus grandis pathologic  
Egrandis TRNA-CHARGING-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01345 0.5kb upstream 0.5kb upstream 4996 true Chr08: 17768734-17773729 Eucalyptus grandis
Eucgr.H01345 0.5kb upstream 0.5kb upstream 500 false Chr08: 17768734-17769233 Eucalyptus grandis
Eucgr.H01345 0.5kb downstream 0.5kb downstream 4996 true Chr08: 17769234-17774229 Eucalyptus grandis
Eucgr.H01345 0.5kb downstream 0.5kb downstream 500 false Chr08: 17773730-17774229 Eucalyptus grandis
Eucgr.H01345 1.0kb upstream 1.0kb upstream 5496 true Chr08: 17768234-17773729 Eucalyptus grandis
Eucgr.H01345 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17768234-17769233 Eucalyptus grandis
Eucgr.H01345 1.0kb downstream 1.0kb downstream 5496 true Chr08: 17769234-17774729 Eucalyptus grandis
Eucgr.H01345 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17773730-17774729 Eucalyptus grandis
Eucgr.H01345 2.0kb upstream 2.0kb upstream 6496 true Chr08: 17767234-17773729 Eucalyptus grandis
Eucgr.H01345 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17767234-17769233 Eucalyptus grandis
Eucgr.H01345 2.0kb downstream 2.0kb downstream 6496 true Chr08: 17769234-17775729 Eucalyptus grandis
Eucgr.H01345 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17773730-17775729 Eucalyptus grandis
Eucgr.H01345 5.0kb upstream 5.0kb upstream 9496 true Chr08: 17764234-17773729 Eucalyptus grandis
Eucgr.H01345 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17764234-17769233 Eucalyptus grandis
Eucgr.H01345 5.0kb downstream 5.0kb downstream 9496 true Chr08: 17769234-17778729 Eucalyptus grandis
Eucgr.H01345 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17773730-17778729 Eucalyptus grandis
Eucgr.H01345 10.0kb upstream 10.0kb upstream 14496 true Chr08: 17759234-17773729 Eucalyptus grandis
Eucgr.H01345 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17759234-17769233 Eucalyptus grandis
Eucgr.H01345 10.0kb downstream 10.0kb downstream 14496 true Chr08: 17769234-17783729 Eucalyptus grandis
Eucgr.H01345 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17773730-17783729 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065023 5270 Rosid View MSA
123740640 5271 Pentapetalae View MSA
122787926 5272 Eudicot View MSA
122046625 5273 Angiosperm View MSA
121349445 5274 Embryophyte View MSA
123426828 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3365 0.0 31.7407    
cufflinks 17.8233 0.0 39.4212   High
cufflinks 11.926 0.0 26.4663    
cufflinks 10.6753 0.0 23.7282   Low
cufflinks 10.7717 0.0 23.9606    
cufflinks 14.6988 0.0 32.5442    

0 Strain