Gene : Eucgr.H01340 E. grandis v2.0
Defline:  (1 of 4) PTHR11081:SF9 - FLAP ENDONUCLEASE 1 Genomic Order:  1252
Name:  ? Eucgr.H01340 Secondary Identifier:  ? PAC:32043818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01340 0.5kb upstream 0.5kb upstream 5284 true Chr08: 17810177-17815460 Eucalyptus grandis
Eucgr.H01340 0.5kb upstream 0.5kb upstream 500 false Chr08: 17814961-17815460 Eucalyptus grandis
Eucgr.H01340 0.5kb downstream 0.5kb downstream 5284 true Chr08: 17809677-17814960 Eucalyptus grandis
Eucgr.H01340 0.5kb downstream 0.5kb downstream 500 false Chr08: 17809677-17810176 Eucalyptus grandis
Eucgr.H01340 1.0kb upstream 1.0kb upstream 5784 true Chr08: 17810177-17815960 Eucalyptus grandis
Eucgr.H01340 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17814961-17815960 Eucalyptus grandis
Eucgr.H01340 1.0kb downstream 1.0kb downstream 5784 true Chr08: 17809177-17814960 Eucalyptus grandis
Eucgr.H01340 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17809177-17810176 Eucalyptus grandis
Eucgr.H01340 2.0kb upstream 2.0kb upstream 6784 true Chr08: 17810177-17816960 Eucalyptus grandis
Eucgr.H01340 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17814961-17816960 Eucalyptus grandis
Eucgr.H01340 2.0kb downstream 2.0kb downstream 6784 true Chr08: 17808177-17814960 Eucalyptus grandis
Eucgr.H01340 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17808177-17810176 Eucalyptus grandis
Eucgr.H01340 5.0kb upstream 5.0kb upstream 9784 true Chr08: 17810177-17819960 Eucalyptus grandis
Eucgr.H01340 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17814961-17819960 Eucalyptus grandis
Eucgr.H01340 5.0kb downstream 5.0kb downstream 9784 true Chr08: 17805177-17814960 Eucalyptus grandis
Eucgr.H01340 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17805177-17810176 Eucalyptus grandis
Eucgr.H01340 10.0kb upstream 10.0kb upstream 14784 true Chr08: 17810177-17824960 Eucalyptus grandis
Eucgr.H01340 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17814961-17824960 Eucalyptus grandis
Eucgr.H01340 10.0kb downstream 10.0kb downstream 14784 true Chr08: 17800177-17814960 Eucalyptus grandis
Eucgr.H01340 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17800177-17810176 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061895 5270 Rosid View MSA
123737846 5271 Pentapetalae View MSA
122788743 5272 Eudicot View MSA
122045143 5273 Angiosperm View MSA
121348118 5274 Embryophyte View MSA
123424263 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.27802 0.0 12.5813    
cufflinks 13.0206 0.0 30.1542   High
cufflinks 9.14161 0.0 22.0116    
cufflinks 4.34779 0.0 10.6721   Low
cufflinks 10.1643 0.0 23.983    
cufflinks 9.62547 0.0 23.5151    

0 Strain