Gene : Eucgr.H01260 E. grandis v2.0
Defline:  (1 of 1) PTHR12069 - DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5 Genomic Order:  1320
Name:  ? Eucgr.H01260 Secondary Identifier:  ? PAC:32041513
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01260 0.5kb upstream 0.5kb upstream 9568 true Chr08: 18695664-18705231 Eucalyptus grandis
Eucgr.H01260 0.5kb upstream 0.5kb upstream 500 false Chr08: 18704732-18705231 Eucalyptus grandis
Eucgr.H01260 0.5kb downstream 0.5kb downstream 9568 true Chr08: 18695164-18704731 Eucalyptus grandis
Eucgr.H01260 0.5kb downstream 0.5kb downstream 500 false Chr08: 18695164-18695663 Eucalyptus grandis
Eucgr.H01260 1.0kb upstream 1.0kb upstream 10068 true Chr08: 18695664-18705731 Eucalyptus grandis
Eucgr.H01260 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18704732-18705731 Eucalyptus grandis
Eucgr.H01260 1.0kb downstream 1.0kb downstream 10068 true Chr08: 18694664-18704731 Eucalyptus grandis
Eucgr.H01260 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18694664-18695663 Eucalyptus grandis
Eucgr.H01260 2.0kb upstream 2.0kb upstream 11068 true Chr08: 18695664-18706731 Eucalyptus grandis
Eucgr.H01260 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18704732-18706731 Eucalyptus grandis
Eucgr.H01260 2.0kb downstream 2.0kb downstream 11068 true Chr08: 18693664-18704731 Eucalyptus grandis
Eucgr.H01260 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18693664-18695663 Eucalyptus grandis
Eucgr.H01260 5.0kb upstream 5.0kb upstream 14068 true Chr08: 18695664-18709731 Eucalyptus grandis
Eucgr.H01260 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18704732-18709731 Eucalyptus grandis
Eucgr.H01260 5.0kb downstream 5.0kb downstream 14068 true Chr08: 18690664-18704731 Eucalyptus grandis
Eucgr.H01260 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18690664-18695663 Eucalyptus grandis
Eucgr.H01260 10.0kb upstream 10.0kb upstream 19068 true Chr08: 18695664-18714731 Eucalyptus grandis
Eucgr.H01260 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18704732-18714731 Eucalyptus grandis
Eucgr.H01260 10.0kb downstream 10.0kb downstream 19068 true Chr08: 18685664-18704731 Eucalyptus grandis
Eucgr.H01260 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18685664-18695663 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063157 5270 Rosid View MSA
123749161 5271 Pentapetalae View MSA
122792104 5272 Eudicot View MSA
122041798 5273 Angiosperm View MSA
123429138 5275 Viridiplantae View MSA
121344108 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.16153 0.0 16.5356    
cufflinks 7.51434 0.0 17.6395    
cufflinks 6.22054 0.0 15.8083    
cufflinks 6.38136 0.0 18.3657    
cufflinks 4.35747 0.0 11.9153   Low
cufflinks 9.97578 0.0 22.9253   High

0 Strain