Gene : Eucgr.H01259 E. grandis v2.0
Defline:  (1 of 2) PTHR12320:SF16 - PROTEIN PHOSPHATASE 2C 80-RELATED Genomic Order:  1321
Name:  ? Eucgr.H01259 Secondary Identifier:  ? PAC:32041334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01259 0.5kb upstream 0.5kb upstream 4073 true Chr08: 18707104-18711176 Eucalyptus grandis
Eucgr.H01259 0.5kb upstream 0.5kb upstream 500 false Chr08: 18707104-18707603 Eucalyptus grandis
Eucgr.H01259 0.5kb downstream 0.5kb downstream 4073 true Chr08: 18707604-18711676 Eucalyptus grandis
Eucgr.H01259 0.5kb downstream 0.5kb downstream 500 false Chr08: 18711177-18711676 Eucalyptus grandis
Eucgr.H01259 1.0kb upstream 1.0kb upstream 4573 true Chr08: 18706604-18711176 Eucalyptus grandis
Eucgr.H01259 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18706604-18707603 Eucalyptus grandis
Eucgr.H01259 1.0kb downstream 1.0kb downstream 4573 true Chr08: 18707604-18712176 Eucalyptus grandis
Eucgr.H01259 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18711177-18712176 Eucalyptus grandis
Eucgr.H01259 2.0kb upstream 2.0kb upstream 5573 true Chr08: 18705604-18711176 Eucalyptus grandis
Eucgr.H01259 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18705604-18707603 Eucalyptus grandis
Eucgr.H01259 2.0kb downstream 2.0kb downstream 5573 true Chr08: 18707604-18713176 Eucalyptus grandis
Eucgr.H01259 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18711177-18713176 Eucalyptus grandis
Eucgr.H01259 5.0kb upstream 5.0kb upstream 8573 true Chr08: 18702604-18711176 Eucalyptus grandis
Eucgr.H01259 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18702604-18707603 Eucalyptus grandis
Eucgr.H01259 5.0kb downstream 5.0kb downstream 8573 true Chr08: 18707604-18716176 Eucalyptus grandis
Eucgr.H01259 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18711177-18716176 Eucalyptus grandis
Eucgr.H01259 10.0kb upstream 10.0kb upstream 13573 true Chr08: 18697604-18711176 Eucalyptus grandis
Eucgr.H01259 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18697604-18707603 Eucalyptus grandis
Eucgr.H01259 10.0kb downstream 10.0kb downstream 13573 true Chr08: 18707604-18721176 Eucalyptus grandis
Eucgr.H01259 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18711177-18721176 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074928 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5475 0.0 33.2609    
cufflinks 8.19431 0.0 19.525    
cufflinks 13.0201 0.0 29.9345    
cufflinks 3.40156 0.0 8.84404   Low
cufflinks 11.3335 0.0 26.3376    
cufflinks 23.2248 0.0 51.94   High

0 Strain