Gene : Eucgr.H01265 E. grandis v2.0
Defline:  (1 of 1) PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED Genomic Order:  1316
Name:  ? Eucgr.H01265 Secondary Identifier:  ? PAC:32043822
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01265 0.5kb upstream 0.5kb upstream 4913 true Chr08: 18646221-18651133 Eucalyptus grandis
Eucgr.H01265 0.5kb upstream 0.5kb upstream 500 false Chr08: 18650634-18651133 Eucalyptus grandis
Eucgr.H01265 0.5kb downstream 0.5kb downstream 4913 true Chr08: 18645721-18650633 Eucalyptus grandis
Eucgr.H01265 0.5kb downstream 0.5kb downstream 500 false Chr08: 18645721-18646220 Eucalyptus grandis
Eucgr.H01265 1.0kb upstream 1.0kb upstream 5413 true Chr08: 18646221-18651633 Eucalyptus grandis
Eucgr.H01265 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18650634-18651633 Eucalyptus grandis
Eucgr.H01265 1.0kb downstream 1.0kb downstream 5413 true Chr08: 18645221-18650633 Eucalyptus grandis
Eucgr.H01265 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18645221-18646220 Eucalyptus grandis
Eucgr.H01265 2.0kb upstream 2.0kb upstream 6413 true Chr08: 18646221-18652633 Eucalyptus grandis
Eucgr.H01265 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18650634-18652633 Eucalyptus grandis
Eucgr.H01265 2.0kb downstream 2.0kb downstream 6413 true Chr08: 18644221-18650633 Eucalyptus grandis
Eucgr.H01265 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18644221-18646220 Eucalyptus grandis
Eucgr.H01265 5.0kb upstream 5.0kb upstream 9413 true Chr08: 18646221-18655633 Eucalyptus grandis
Eucgr.H01265 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18650634-18655633 Eucalyptus grandis
Eucgr.H01265 5.0kb downstream 5.0kb downstream 9413 true Chr08: 18641221-18650633 Eucalyptus grandis
Eucgr.H01265 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18641221-18646220 Eucalyptus grandis
Eucgr.H01265 10.0kb upstream 10.0kb upstream 14413 true Chr08: 18646221-18660633 Eucalyptus grandis
Eucgr.H01265 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18650634-18660633 Eucalyptus grandis
Eucgr.H01265 10.0kb downstream 10.0kb downstream 14413 true Chr08: 18636221-18650633 Eucalyptus grandis
Eucgr.H01265 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18636221-18646220 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063096 5270 Rosid View MSA
123741004 5271 Pentapetalae View MSA
122785820 5272 Eudicot View MSA
122046591 5273 Angiosperm View MSA
121310628 5274 Embryophyte View MSA
123348063 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3453 0.0 23.7109    
cufflinks 15.6563 0.0 35.0247   High
cufflinks 11.6763 0.0 26.5365    
cufflinks 12.0059 0.0 27.2176    
cufflinks 10.5167 0.0 24.0449    
cufflinks 10.3989 0.0 23.8287    

0 Strain