Gene : Eucgr.H01253 E. grandis v2.0
Defline:  (1 of 4) PTHR11599:SF5 - PROTEASOME SUBUNIT BETA TYPE-4 Genomic Order:  1326
Name:  ? Eucgr.H01253 Secondary Identifier:  ? PAC:32042551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01253 0.5kb upstream 0.5kb upstream 4184 true Chr08: 18800402-18804585 Eucalyptus grandis
Eucgr.H01253 0.5kb upstream 0.5kb upstream 500 false Chr08: 18800402-18800901 Eucalyptus grandis
Eucgr.H01253 0.5kb downstream 0.5kb downstream 4184 true Chr08: 18800902-18805085 Eucalyptus grandis
Eucgr.H01253 0.5kb downstream 0.5kb downstream 500 false Chr08: 18804586-18805085 Eucalyptus grandis
Eucgr.H01253 1.0kb upstream 1.0kb upstream 4684 true Chr08: 18799902-18804585 Eucalyptus grandis
Eucgr.H01253 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18799902-18800901 Eucalyptus grandis
Eucgr.H01253 1.0kb downstream 1.0kb downstream 4684 true Chr08: 18800902-18805585 Eucalyptus grandis
Eucgr.H01253 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18804586-18805585 Eucalyptus grandis
Eucgr.H01253 2.0kb upstream 2.0kb upstream 5684 true Chr08: 18798902-18804585 Eucalyptus grandis
Eucgr.H01253 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18798902-18800901 Eucalyptus grandis
Eucgr.H01253 2.0kb downstream 2.0kb downstream 5684 true Chr08: 18800902-18806585 Eucalyptus grandis
Eucgr.H01253 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18804586-18806585 Eucalyptus grandis
Eucgr.H01253 5.0kb upstream 5.0kb upstream 8684 true Chr08: 18795902-18804585 Eucalyptus grandis
Eucgr.H01253 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18795902-18800901 Eucalyptus grandis
Eucgr.H01253 5.0kb downstream 5.0kb downstream 8684 true Chr08: 18800902-18809585 Eucalyptus grandis
Eucgr.H01253 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18804586-18809585 Eucalyptus grandis
Eucgr.H01253 10.0kb upstream 10.0kb upstream 13684 true Chr08: 18790902-18804585 Eucalyptus grandis
Eucgr.H01253 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18790902-18800901 Eucalyptus grandis
Eucgr.H01253 10.0kb downstream 10.0kb downstream 13684 true Chr08: 18800902-18814585 Eucalyptus grandis
Eucgr.H01253 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18804586-18814585 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062150 5270 Rosid View MSA
123753657 5271 Pentapetalae View MSA
122793050 5272 Eudicot View MSA
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.8838 0.0 132.577 High  
cufflinks 82.7111 0.0 184.771 High  
cufflinks 53.5305 0.0 118.424 High Low
cufflinks 98.3224 0.0 221.321 High High
cufflinks 70.9069 0.0 157.537 High  
cufflinks 62.7053 0.0 138.857 High  

0 Strain