Gene : Eucgr.H01257 E. grandis v2.0
Defline:  (1 of 1) PTHR31636:SF53 - SCARECROW-LIKE PROTEIN 15 Genomic Order:  1323
Name:  ? Eucgr.H01257 Secondary Identifier:  ? PAC:32043239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01257 0.5kb upstream 0.5kb upstream 2331 true Chr08: 18726496-18728826 Eucalyptus grandis
Eucgr.H01257 0.5kb upstream 0.5kb upstream 500 false Chr08: 18726496-18726995 Eucalyptus grandis
Eucgr.H01257 0.5kb downstream 0.5kb downstream 2331 true Chr08: 18726996-18729326 Eucalyptus grandis
Eucgr.H01257 0.5kb downstream 0.5kb downstream 500 false Chr08: 18728827-18729326 Eucalyptus grandis
Eucgr.H01257 1.0kb upstream 1.0kb upstream 2831 true Chr08: 18725996-18728826 Eucalyptus grandis
Eucgr.H01257 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18725996-18726995 Eucalyptus grandis
Eucgr.H01257 1.0kb downstream 1.0kb downstream 2831 true Chr08: 18726996-18729826 Eucalyptus grandis
Eucgr.H01257 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18728827-18729826 Eucalyptus grandis
Eucgr.H01257 2.0kb upstream 2.0kb upstream 3831 true Chr08: 18724996-18728826 Eucalyptus grandis
Eucgr.H01257 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18724996-18726995 Eucalyptus grandis
Eucgr.H01257 2.0kb downstream 2.0kb downstream 3831 true Chr08: 18726996-18730826 Eucalyptus grandis
Eucgr.H01257 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18728827-18730826 Eucalyptus grandis
Eucgr.H01257 5.0kb upstream 5.0kb upstream 6831 true Chr08: 18721996-18728826 Eucalyptus grandis
Eucgr.H01257 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18721996-18726995 Eucalyptus grandis
Eucgr.H01257 5.0kb downstream 5.0kb downstream 6831 true Chr08: 18726996-18733826 Eucalyptus grandis
Eucgr.H01257 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18728827-18733826 Eucalyptus grandis
Eucgr.H01257 10.0kb upstream 10.0kb upstream 11831 true Chr08: 18716996-18728826 Eucalyptus grandis
Eucgr.H01257 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18716996-18726995 Eucalyptus grandis
Eucgr.H01257 10.0kb downstream 10.0kb downstream 11831 true Chr08: 18726996-18738826 Eucalyptus grandis
Eucgr.H01257 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18728827-18738826 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061987 5270 Rosid View MSA
123738804 5271 Pentapetalae View MSA
122792539 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.741212 0.0 2.24482    
cufflinks 0.524814 0.0 1.68962 Low  
cufflinks 2.14994 0.0 5.88743    
cufflinks 0.835285 0.0 2.54712    
cufflinks 0.346093 0.0 1.17165 Low Low
cufflinks 7.30465 0.0 17.3008   High

0 Strain