Gene : Eucgr.H01279 E. grandis v2.0
Defline:  (1 of 3) 3.2.2.21 - DNA-3-methyladenine glycosylase II / DNA-3-methyladenine glycosidase II Genomic Order:  1305
Name:  ? Eucgr.H01279 Secondary Identifier:  ? PAC:32042048
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01279 0.5kb upstream 0.5kb upstream 1540 true Chr08: 18517132-18518671 Eucalyptus grandis
Eucgr.H01279 0.5kb upstream 0.5kb upstream 500 false Chr08: 18518172-18518671 Eucalyptus grandis
Eucgr.H01279 0.5kb downstream 0.5kb downstream 1540 true Chr08: 18516632-18518171 Eucalyptus grandis
Eucgr.H01279 0.5kb downstream 0.5kb downstream 500 false Chr08: 18516632-18517131 Eucalyptus grandis
Eucgr.H01279 1.0kb upstream 1.0kb upstream 2040 true Chr08: 18517132-18519171 Eucalyptus grandis
Eucgr.H01279 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18518172-18519171 Eucalyptus grandis
Eucgr.H01279 1.0kb downstream 1.0kb downstream 2040 true Chr08: 18516132-18518171 Eucalyptus grandis
Eucgr.H01279 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18516132-18517131 Eucalyptus grandis
Eucgr.H01279 2.0kb upstream 2.0kb upstream 3040 true Chr08: 18517132-18520171 Eucalyptus grandis
Eucgr.H01279 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18518172-18520171 Eucalyptus grandis
Eucgr.H01279 2.0kb downstream 2.0kb downstream 3040 true Chr08: 18515132-18518171 Eucalyptus grandis
Eucgr.H01279 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18515132-18517131 Eucalyptus grandis
Eucgr.H01279 5.0kb upstream 5.0kb upstream 6040 true Chr08: 18517132-18523171 Eucalyptus grandis
Eucgr.H01279 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18518172-18523171 Eucalyptus grandis
Eucgr.H01279 5.0kb downstream 5.0kb downstream 6040 true Chr08: 18512132-18518171 Eucalyptus grandis
Eucgr.H01279 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18512132-18517131 Eucalyptus grandis
Eucgr.H01279 10.0kb upstream 10.0kb upstream 11040 true Chr08: 18517132-18528171 Eucalyptus grandis
Eucgr.H01279 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18518172-18528171 Eucalyptus grandis
Eucgr.H01279 10.0kb downstream 10.0kb downstream 11040 true Chr08: 18507132-18518171 Eucalyptus grandis
Eucgr.H01279 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18507132-18517131 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027501 5273 Angiosperm View MSA
124050187 5270 Rosid View MSA
123646941 5271 Pentapetalae View MSA
122680964 5272 Eudicot View MSA
121350563 5274 Embryophyte View MSA
123425595 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.87882 0.0 13.0646    
cufflinks 1.04325 0.0 3.35869   Low
cufflinks 8.78337 0.0 22.4732    
cufflinks 6.4334 0.0 17.0378    
cufflinks 1.4044 0.0 4.34388   Low
cufflinks 9.38892 0.0 23.3352    

0 Strain