Gene : Eucgr.H02476 E. grandis v2.0
Defline:  (1 of 2) PTHR30573 - QUINOLINATE SYNTHETASE A Genomic Order:  1907
Name:  ? Eucgr.H02476 Secondary Identifier:  ? PAC:32045091
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02476 0.5kb upstream 0.5kb upstream 2268 true Chr08: 32420109-32422376 Eucalyptus grandis
Eucgr.H02476 0.5kb upstream 0.5kb upstream 500 false Chr08: 32421877-32422376 Eucalyptus grandis
Eucgr.H02476 0.5kb downstream 0.5kb downstream 2268 true Chr08: 32419609-32421876 Eucalyptus grandis
Eucgr.H02476 0.5kb downstream 0.5kb downstream 500 false Chr08: 32419609-32420108 Eucalyptus grandis
Eucgr.H02476 1.0kb upstream 1.0kb upstream 2768 true Chr08: 32420109-32422876 Eucalyptus grandis
Eucgr.H02476 1.0kb upstream 1.0kb upstream 1000 false Chr08: 32421877-32422876 Eucalyptus grandis
Eucgr.H02476 1.0kb downstream 1.0kb downstream 2768 true Chr08: 32419109-32421876 Eucalyptus grandis
Eucgr.H02476 1.0kb downstream 1.0kb downstream 1000 false Chr08: 32419109-32420108 Eucalyptus grandis
Eucgr.H02476 2.0kb upstream 2.0kb upstream 3768 true Chr08: 32420109-32423876 Eucalyptus grandis
Eucgr.H02476 2.0kb upstream 2.0kb upstream 2000 false Chr08: 32421877-32423876 Eucalyptus grandis
Eucgr.H02476 2.0kb downstream 2.0kb downstream 3768 true Chr08: 32418109-32421876 Eucalyptus grandis
Eucgr.H02476 2.0kb downstream 2.0kb downstream 2000 false Chr08: 32418109-32420108 Eucalyptus grandis
Eucgr.H02476 5.0kb upstream 5.0kb upstream 6768 true Chr08: 32420109-32426876 Eucalyptus grandis
Eucgr.H02476 5.0kb upstream 5.0kb upstream 5000 false Chr08: 32421877-32426876 Eucalyptus grandis
Eucgr.H02476 5.0kb downstream 5.0kb downstream 6768 true Chr08: 32415109-32421876 Eucalyptus grandis
Eucgr.H02476 5.0kb downstream 5.0kb downstream 5000 false Chr08: 32415109-32420108 Eucalyptus grandis
Eucgr.H02476 10.0kb upstream 10.0kb upstream 11768 true Chr08: 32420109-32431876 Eucalyptus grandis
Eucgr.H02476 10.0kb upstream 10.0kb upstream 10000 false Chr08: 32421877-32431876 Eucalyptus grandis
Eucgr.H02476 10.0kb downstream 10.0kb downstream 11768 true Chr08: 32410109-32421876 Eucalyptus grandis
Eucgr.H02476 10.0kb downstream 10.0kb downstream 10000 false Chr08: 32410109-32420108 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026610 5273 Angiosperm View MSA
123738907 5271 Pentapetalae View MSA
124070856 5270 Rosid View MSA
122794686 5272 Eudicot View MSA
121351730 5274 Embryophyte View MSA
123428426 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.9501 0.0 5.60362    
cufflinks 2.50305 0.0 7.08897   High
cufflinks 0.927985 0.0 2.94296    
cufflinks 0.794385 0.0 2.58363   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.30533 0.0 3.85932    

0 Strain