Gene : Eucgr.H02488 E. grandis v2.0
Defline:  (1 of 3) PTHR12595:SF6 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 9 Genomic Order:  1919
Name:  ? Eucgr.H02488 Secondary Identifier:  ? PAC:32042927
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02488 0.5kb upstream 0.5kb upstream 5280 true Chr08: 32963950-32969229 Eucalyptus grandis
Eucgr.H02488 0.5kb upstream 0.5kb upstream 500 false Chr08: 32963950-32964449 Eucalyptus grandis
Eucgr.H02488 0.5kb downstream 0.5kb downstream 5280 true Chr08: 32964450-32969729 Eucalyptus grandis
Eucgr.H02488 0.5kb downstream 0.5kb downstream 500 false Chr08: 32969230-32969729 Eucalyptus grandis
Eucgr.H02488 1.0kb upstream 1.0kb upstream 5780 true Chr08: 32963450-32969229 Eucalyptus grandis
Eucgr.H02488 1.0kb upstream 1.0kb upstream 1000 false Chr08: 32963450-32964449 Eucalyptus grandis
Eucgr.H02488 1.0kb downstream 1.0kb downstream 5780 true Chr08: 32964450-32970229 Eucalyptus grandis
Eucgr.H02488 1.0kb downstream 1.0kb downstream 1000 false Chr08: 32969230-32970229 Eucalyptus grandis
Eucgr.H02488 2.0kb upstream 2.0kb upstream 6780 true Chr08: 32962450-32969229 Eucalyptus grandis
Eucgr.H02488 2.0kb upstream 2.0kb upstream 2000 false Chr08: 32962450-32964449 Eucalyptus grandis
Eucgr.H02488 2.0kb downstream 2.0kb downstream 6780 true Chr08: 32964450-32971229 Eucalyptus grandis
Eucgr.H02488 2.0kb downstream 2.0kb downstream 2000 false Chr08: 32969230-32971229 Eucalyptus grandis
Eucgr.H02488 5.0kb upstream 5.0kb upstream 9780 true Chr08: 32959450-32969229 Eucalyptus grandis
Eucgr.H02488 5.0kb upstream 5.0kb upstream 5000 false Chr08: 32959450-32964449 Eucalyptus grandis
Eucgr.H02488 5.0kb downstream 5.0kb downstream 9780 true Chr08: 32964450-32974229 Eucalyptus grandis
Eucgr.H02488 5.0kb downstream 5.0kb downstream 5000 false Chr08: 32969230-32974229 Eucalyptus grandis
Eucgr.H02488 10.0kb upstream 10.0kb upstream 14780 true Chr08: 32954450-32969229 Eucalyptus grandis
Eucgr.H02488 10.0kb upstream 10.0kb upstream 10000 false Chr08: 32954450-32964449 Eucalyptus grandis
Eucgr.H02488 10.0kb downstream 10.0kb downstream 14780 true Chr08: 32964450-32979229 Eucalyptus grandis
Eucgr.H02488 10.0kb downstream 10.0kb downstream 10000 false Chr08: 32969230-32979229 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067490 5270 Rosid View MSA
123736681 5271 Pentapetalae View MSA
122786173 5272 Eudicot View MSA
122043931 5273 Angiosperm View MSA
121344953 5274 Embryophyte View MSA
123428826 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.076 0.0 7.3644   High
cufflinks 0.758167 0.0 3.32539 Low  
cufflinks 1.74745 0.0 6.08154    
cufflinks 1.58273 0.0 5.20667    
cufflinks 0.804214 0.0 3.01313    
cufflinks 0.815728 0.0 5.47475 Low  

0 Strain