Gene : Eucgr.H02470 E. grandis v2.0
Defline:  (1 of 1) PTHR32093:SF13 - SERINE/ARGININE REPETITIVE MATRIX PROTEIN 2 Genomic Order:  1901
Name:  ? Eucgr.H02470 Secondary Identifier:  ? PAC:32043257
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02470 0.5kb upstream 0.5kb upstream 5390 true Chr08: 32361379-32366768 Eucalyptus grandis
Eucgr.H02470 0.5kb upstream 0.5kb upstream 500 false Chr08: 32366269-32366768 Eucalyptus grandis
Eucgr.H02470 0.5kb downstream 0.5kb downstream 5390 true Chr08: 32360879-32366268 Eucalyptus grandis
Eucgr.H02470 0.5kb downstream 0.5kb downstream 500 false Chr08: 32360879-32361378 Eucalyptus grandis
Eucgr.H02470 1.0kb upstream 1.0kb upstream 5890 true Chr08: 32361379-32367268 Eucalyptus grandis
Eucgr.H02470 1.0kb upstream 1.0kb upstream 1000 false Chr08: 32366269-32367268 Eucalyptus grandis
Eucgr.H02470 1.0kb downstream 1.0kb downstream 5890 true Chr08: 32360379-32366268 Eucalyptus grandis
Eucgr.H02470 1.0kb downstream 1.0kb downstream 1000 false Chr08: 32360379-32361378 Eucalyptus grandis
Eucgr.H02470 2.0kb upstream 2.0kb upstream 6890 true Chr08: 32361379-32368268 Eucalyptus grandis
Eucgr.H02470 2.0kb upstream 2.0kb upstream 2000 false Chr08: 32366269-32368268 Eucalyptus grandis
Eucgr.H02470 2.0kb downstream 2.0kb downstream 6890 true Chr08: 32359379-32366268 Eucalyptus grandis
Eucgr.H02470 2.0kb downstream 2.0kb downstream 2000 false Chr08: 32359379-32361378 Eucalyptus grandis
Eucgr.H02470 5.0kb upstream 5.0kb upstream 9890 true Chr08: 32361379-32371268 Eucalyptus grandis
Eucgr.H02470 5.0kb upstream 5.0kb upstream 5000 false Chr08: 32366269-32371268 Eucalyptus grandis
Eucgr.H02470 5.0kb downstream 5.0kb downstream 9890 true Chr08: 32356379-32366268 Eucalyptus grandis
Eucgr.H02470 5.0kb downstream 5.0kb downstream 5000 false Chr08: 32356379-32361378 Eucalyptus grandis
Eucgr.H02470 10.0kb upstream 10.0kb upstream 14890 true Chr08: 32361379-32376268 Eucalyptus grandis
Eucgr.H02470 10.0kb upstream 10.0kb upstream 10000 false Chr08: 32366269-32376268 Eucalyptus grandis
Eucgr.H02470 10.0kb downstream 10.0kb downstream 14890 true Chr08: 32351379-32366268 Eucalyptus grandis
Eucgr.H02470 10.0kb downstream 10.0kb downstream 10000 false Chr08: 32351379-32361378 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069039 5270 Rosid View MSA
123741456 5271 Pentapetalae View MSA
122788906 5272 Eudicot View MSA
122043009 5273 Angiosperm View MSA
121350185 5274 Embryophyte View MSA
123426025 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.0187 0.0 45.0539    
cufflinks 12.9405 0.0 29.6559    
cufflinks 18.6435 0.0 44.2421    
cufflinks 18.0125 0.0 42.6067    
cufflinks 9.46391 0.0 24.4229   Low
cufflinks 20.1589 0.0 47.909    

0 Strain