Gene : Eucgr.H02343 E. grandis v2.0
Defline:  (1 of 3) PTHR11010:SF38 - LYSOSOMAL PRO-X CARBOXYPEPTIDASE Genomic Order:  1808
Name:  ? Eucgr.H02343 Secondary Identifier:  ? PAC:32044566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02343 0.5kb upstream 0.5kb upstream 10680 true Chr08: 30088629-30099308 Eucalyptus grandis
Eucgr.H02343 0.5kb upstream 0.5kb upstream 500 false Chr08: 30088629-30089128 Eucalyptus grandis
Eucgr.H02343 0.5kb downstream 0.5kb downstream 10680 true Chr08: 30089129-30099808 Eucalyptus grandis
Eucgr.H02343 0.5kb downstream 0.5kb downstream 500 false Chr08: 30099309-30099808 Eucalyptus grandis
Eucgr.H02343 1.0kb upstream 1.0kb upstream 11180 true Chr08: 30088129-30099308 Eucalyptus grandis
Eucgr.H02343 1.0kb upstream 1.0kb upstream 1000 false Chr08: 30088129-30089128 Eucalyptus grandis
Eucgr.H02343 1.0kb downstream 1.0kb downstream 11180 true Chr08: 30089129-30100308 Eucalyptus grandis
Eucgr.H02343 1.0kb downstream 1.0kb downstream 1000 false Chr08: 30099309-30100308 Eucalyptus grandis
Eucgr.H02343 2.0kb upstream 2.0kb upstream 12180 true Chr08: 30087129-30099308 Eucalyptus grandis
Eucgr.H02343 2.0kb upstream 2.0kb upstream 2000 false Chr08: 30087129-30089128 Eucalyptus grandis
Eucgr.H02343 2.0kb downstream 2.0kb downstream 12180 true Chr08: 30089129-30101308 Eucalyptus grandis
Eucgr.H02343 2.0kb downstream 2.0kb downstream 2000 false Chr08: 30099309-30101308 Eucalyptus grandis
Eucgr.H02343 5.0kb upstream 5.0kb upstream 15180 true Chr08: 30084129-30099308 Eucalyptus grandis
Eucgr.H02343 5.0kb upstream 5.0kb upstream 5000 false Chr08: 30084129-30089128 Eucalyptus grandis
Eucgr.H02343 5.0kb downstream 5.0kb downstream 15180 true Chr08: 30089129-30104308 Eucalyptus grandis
Eucgr.H02343 5.0kb downstream 5.0kb downstream 5000 false Chr08: 30099309-30104308 Eucalyptus grandis
Eucgr.H02343 10.0kb upstream 10.0kb upstream 20180 true Chr08: 30079129-30099308 Eucalyptus grandis
Eucgr.H02343 10.0kb upstream 10.0kb upstream 10000 false Chr08: 30079129-30089128 Eucalyptus grandis
Eucgr.H02343 10.0kb downstream 10.0kb downstream 20180 true Chr08: 30089129-30109308 Eucalyptus grandis
Eucgr.H02343 10.0kb downstream 10.0kb downstream 10000 false Chr08: 30099309-30109308 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070997 5270 Rosid View MSA
123753394 5271 Pentapetalae View MSA
122793921 5272 Eudicot View MSA
122049838 5273 Angiosperm View MSA
121344690 5274 Embryophyte View MSA
123428837 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.89399 0.0 14.0438   Low
cufflinks 17.642 0.0 39.154    
cufflinks 7.0597 0.0 16.5171    
cufflinks 25.3582 0.0 56.0778   High
cufflinks 18.299 0.0 40.6147    
cufflinks 6.49133 0.0 15.3745    

0 Strain