Gene : Eucgr.H02335 E. grandis v2.0
Defline:  (1 of 152) PF00847 - AP2 domain (AP2) Genomic Order:  1800
Name:  ? Eucgr.H02335 Secondary Identifier:  ? PAC:32044591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02335 0.5kb upstream 0.5kb upstream 3900 true Chr08: 29927853-29931752 Eucalyptus grandis
Eucgr.H02335 0.5kb upstream 0.5kb upstream 500 false Chr08: 29927853-29928352 Eucalyptus grandis
Eucgr.H02335 0.5kb downstream 0.5kb downstream 3900 true Chr08: 29928353-29932252 Eucalyptus grandis
Eucgr.H02335 0.5kb downstream 0.5kb downstream 500 false Chr08: 29931753-29932252 Eucalyptus grandis
Eucgr.H02335 1.0kb upstream 1.0kb upstream 4400 true Chr08: 29927353-29931752 Eucalyptus grandis
Eucgr.H02335 1.0kb upstream 1.0kb upstream 1000 false Chr08: 29927353-29928352 Eucalyptus grandis
Eucgr.H02335 1.0kb downstream 1.0kb downstream 4400 true Chr08: 29928353-29932752 Eucalyptus grandis
Eucgr.H02335 1.0kb downstream 1.0kb downstream 1000 false Chr08: 29931753-29932752 Eucalyptus grandis
Eucgr.H02335 2.0kb upstream 2.0kb upstream 5400 true Chr08: 29926353-29931752 Eucalyptus grandis
Eucgr.H02335 2.0kb upstream 2.0kb upstream 2000 false Chr08: 29926353-29928352 Eucalyptus grandis
Eucgr.H02335 2.0kb downstream 2.0kb downstream 5400 true Chr08: 29928353-29933752 Eucalyptus grandis
Eucgr.H02335 2.0kb downstream 2.0kb downstream 2000 false Chr08: 29931753-29933752 Eucalyptus grandis
Eucgr.H02335 5.0kb upstream 5.0kb upstream 8400 true Chr08: 29923353-29931752 Eucalyptus grandis
Eucgr.H02335 5.0kb upstream 5.0kb upstream 5000 false Chr08: 29923353-29928352 Eucalyptus grandis
Eucgr.H02335 5.0kb downstream 5.0kb downstream 8400 true Chr08: 29928353-29936752 Eucalyptus grandis
Eucgr.H02335 5.0kb downstream 5.0kb downstream 5000 false Chr08: 29931753-29936752 Eucalyptus grandis
Eucgr.H02335 10.0kb upstream 10.0kb upstream 13400 true Chr08: 29918353-29931752 Eucalyptus grandis
Eucgr.H02335 10.0kb upstream 10.0kb upstream 10000 false Chr08: 29918353-29928352 Eucalyptus grandis
Eucgr.H02335 10.0kb downstream 10.0kb downstream 13400 true Chr08: 29928353-29941752 Eucalyptus grandis
Eucgr.H02335 10.0kb downstream 10.0kb downstream 10000 false Chr08: 29931753-29941752 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069509 5270 Rosid View MSA
123749531 5271 Pentapetalae View MSA
122794764 5272 Eudicot View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.53752 0.0 8.9032   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.72775 0.0 4.66462    
cufflinks 0.879591 0.0 2.54331    
cufflinks 1.45005 0.0 3.9764    
cufflinks 0.369218 0.0 1.18743 Low Low

0 Strain