Gene : Eucgr.H02309 E. grandis v2.0
Defline:  (1 of 12) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1777
Name:  ? Eucgr.H02309 Secondary Identifier:  ? PAC:32045717
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02309 0.5kb upstream 0.5kb upstream 6650 true Chr08: 29497268-29503917 Eucalyptus grandis
Eucgr.H02309 0.5kb upstream 0.5kb upstream 500 false Chr08: 29497268-29497767 Eucalyptus grandis
Eucgr.H02309 0.5kb downstream 0.5kb downstream 6650 true Chr08: 29497768-29504417 Eucalyptus grandis
Eucgr.H02309 0.5kb downstream 0.5kb downstream 500 false Chr08: 29503918-29504417 Eucalyptus grandis
Eucgr.H02309 1.0kb upstream 1.0kb upstream 7150 true Chr08: 29496768-29503917 Eucalyptus grandis
Eucgr.H02309 1.0kb upstream 1.0kb upstream 1000 false Chr08: 29496768-29497767 Eucalyptus grandis
Eucgr.H02309 1.0kb downstream 1.0kb downstream 7150 true Chr08: 29497768-29504917 Eucalyptus grandis
Eucgr.H02309 1.0kb downstream 1.0kb downstream 1000 false Chr08: 29503918-29504917 Eucalyptus grandis
Eucgr.H02309 2.0kb upstream 2.0kb upstream 8150 true Chr08: 29495768-29503917 Eucalyptus grandis
Eucgr.H02309 2.0kb upstream 2.0kb upstream 2000 false Chr08: 29495768-29497767 Eucalyptus grandis
Eucgr.H02309 2.0kb downstream 2.0kb downstream 8150 true Chr08: 29497768-29505917 Eucalyptus grandis
Eucgr.H02309 2.0kb downstream 2.0kb downstream 2000 false Chr08: 29503918-29505917 Eucalyptus grandis
Eucgr.H02309 5.0kb upstream 5.0kb upstream 11150 true Chr08: 29492768-29503917 Eucalyptus grandis
Eucgr.H02309 5.0kb upstream 5.0kb upstream 5000 false Chr08: 29492768-29497767 Eucalyptus grandis
Eucgr.H02309 5.0kb downstream 5.0kb downstream 11150 true Chr08: 29497768-29508917 Eucalyptus grandis
Eucgr.H02309 5.0kb downstream 5.0kb downstream 5000 false Chr08: 29503918-29508917 Eucalyptus grandis
Eucgr.H02309 10.0kb upstream 10.0kb upstream 16150 true Chr08: 29487768-29503917 Eucalyptus grandis
Eucgr.H02309 10.0kb upstream 10.0kb upstream 10000 false Chr08: 29487768-29497767 Eucalyptus grandis
Eucgr.H02309 10.0kb downstream 10.0kb downstream 16150 true Chr08: 29497768-29513917 Eucalyptus grandis
Eucgr.H02309 10.0kb downstream 10.0kb downstream 10000 false Chr08: 29503918-29513917 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050394 5270 Rosid View MSA
123748612 5271 Pentapetalae View MSA
122791093 5272 Eudicot View MSA
122046985 5273 Angiosperm View MSA
121347235 5274 Embryophyte View MSA
123380515 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.33061 0.0 3.43996    
cufflinks 1.69331 0.0 4.25328   High
cufflinks 1.00038 0.0 2.64616    
cufflinks 0.989714 0.0 2.60814    
cufflinks 1.19308 0.0 3.11241    
cufflinks 0.919817 0.0 2.47207   Low

0 Strain