Gene : Eucgr.H02219 E. grandis v2.0
Defline:  (1 of 2) PTHR10896:SF17 - BETA-1,4-XYLOSYLTRANSFERASE IRX14-RELATED Genomic Order:  1706
Name:  ? Eucgr.H02219 Secondary Identifier:  ? PAC:32041917
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5800 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02219 0.5kb upstream 0.5kb upstream 3081 true Chr08: 28051956-28055036 Eucalyptus grandis
Eucgr.H02219 0.5kb upstream 0.5kb upstream 500 false Chr08: 28051956-28052455 Eucalyptus grandis
Eucgr.H02219 0.5kb downstream 0.5kb downstream 3081 true Chr08: 28052456-28055536 Eucalyptus grandis
Eucgr.H02219 0.5kb downstream 0.5kb downstream 500 false Chr08: 28055037-28055536 Eucalyptus grandis
Eucgr.H02219 1.0kb upstream 1.0kb upstream 3581 true Chr08: 28051456-28055036 Eucalyptus grandis
Eucgr.H02219 1.0kb upstream 1.0kb upstream 1000 false Chr08: 28051456-28052455 Eucalyptus grandis
Eucgr.H02219 1.0kb downstream 1.0kb downstream 3581 true Chr08: 28052456-28056036 Eucalyptus grandis
Eucgr.H02219 1.0kb downstream 1.0kb downstream 1000 false Chr08: 28055037-28056036 Eucalyptus grandis
Eucgr.H02219 2.0kb upstream 2.0kb upstream 4581 true Chr08: 28050456-28055036 Eucalyptus grandis
Eucgr.H02219 2.0kb upstream 2.0kb upstream 2000 false Chr08: 28050456-28052455 Eucalyptus grandis
Eucgr.H02219 2.0kb downstream 2.0kb downstream 4581 true Chr08: 28052456-28057036 Eucalyptus grandis
Eucgr.H02219 2.0kb downstream 2.0kb downstream 2000 false Chr08: 28055037-28057036 Eucalyptus grandis
Eucgr.H02219 5.0kb upstream 5.0kb upstream 7581 true Chr08: 28047456-28055036 Eucalyptus grandis
Eucgr.H02219 5.0kb upstream 5.0kb upstream 5000 false Chr08: 28047456-28052455 Eucalyptus grandis
Eucgr.H02219 5.0kb downstream 5.0kb downstream 7581 true Chr08: 28052456-28060036 Eucalyptus grandis
Eucgr.H02219 5.0kb downstream 5.0kb downstream 5000 false Chr08: 28055037-28060036 Eucalyptus grandis
Eucgr.H02219 10.0kb upstream 10.0kb upstream 12581 true Chr08: 28042456-28055036 Eucalyptus grandis
Eucgr.H02219 10.0kb upstream 10.0kb upstream 10000 false Chr08: 28042456-28052455 Eucalyptus grandis
Eucgr.H02219 10.0kb downstream 10.0kb downstream 12581 true Chr08: 28052456-28065036 Eucalyptus grandis
Eucgr.H02219 10.0kb downstream 10.0kb downstream 10000 false Chr08: 28055037-28065036 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041384 5273 Angiosperm View MSA
124066029 5270 Rosid View MSA
123737943 5271 Pentapetalae View MSA
122790258 5272 Eudicot View MSA
121350855 5274 Embryophyte View MSA
123381907 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.802665 0.0 2.34003    
cufflinks 112.774 0.0 265.475 High High
cufflinks 0.522953 0.0 1.6074   Low
cufflinks 55.0799 0.0 123.497 High High
cufflinks 4.72977 0.0 11.5654    
cufflinks 4.82443 0.0 11.703    

0 Strain