Gene : Eucgr.H02071 E. grandis v2.0
Defline:  (1 of 2) PTHR31580:SF3 - FILAMENT-LIKE PLANT PROTEIN 7 Genomic Order:  1620
Name:  ? Eucgr.H02071 Secondary Identifier:  ? PAC:32045395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02071 0.5kb upstream 0.5kb upstream 6067 true Chr08: 25551380-25557446 Eucalyptus grandis
Eucgr.H02071 0.5kb upstream 0.5kb upstream 500 false Chr08: 25556947-25557446 Eucalyptus grandis
Eucgr.H02071 0.5kb downstream 0.5kb downstream 6067 true Chr08: 25550880-25556946 Eucalyptus grandis
Eucgr.H02071 0.5kb downstream 0.5kb downstream 500 false Chr08: 25550880-25551379 Eucalyptus grandis
Eucgr.H02071 1.0kb upstream 1.0kb upstream 6567 true Chr08: 25551380-25557946 Eucalyptus grandis
Eucgr.H02071 1.0kb upstream 1.0kb upstream 1000 false Chr08: 25556947-25557946 Eucalyptus grandis
Eucgr.H02071 1.0kb downstream 1.0kb downstream 6567 true Chr08: 25550380-25556946 Eucalyptus grandis
Eucgr.H02071 1.0kb downstream 1.0kb downstream 1000 false Chr08: 25550380-25551379 Eucalyptus grandis
Eucgr.H02071 2.0kb upstream 2.0kb upstream 7567 true Chr08: 25551380-25558946 Eucalyptus grandis
Eucgr.H02071 2.0kb upstream 2.0kb upstream 2000 false Chr08: 25556947-25558946 Eucalyptus grandis
Eucgr.H02071 2.0kb downstream 2.0kb downstream 7567 true Chr08: 25549380-25556946 Eucalyptus grandis
Eucgr.H02071 2.0kb downstream 2.0kb downstream 2000 false Chr08: 25549380-25551379 Eucalyptus grandis
Eucgr.H02071 5.0kb upstream 5.0kb upstream 10567 true Chr08: 25551380-25561946 Eucalyptus grandis
Eucgr.H02071 5.0kb upstream 5.0kb upstream 5000 false Chr08: 25556947-25561946 Eucalyptus grandis
Eucgr.H02071 5.0kb downstream 5.0kb downstream 10567 true Chr08: 25546380-25556946 Eucalyptus grandis
Eucgr.H02071 5.0kb downstream 5.0kb downstream 5000 false Chr08: 25546380-25551379 Eucalyptus grandis
Eucgr.H02071 10.0kb upstream 10.0kb upstream 15567 true Chr08: 25551380-25566946 Eucalyptus grandis
Eucgr.H02071 10.0kb upstream 10.0kb upstream 10000 false Chr08: 25556947-25566946 Eucalyptus grandis
Eucgr.H02071 10.0kb downstream 10.0kb downstream 15567 true Chr08: 25541380-25556946 Eucalyptus grandis
Eucgr.H02071 10.0kb downstream 10.0kb downstream 10000 false Chr08: 25541380-25551379 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061123 5270 Rosid View MSA
123744650 5271 Pentapetalae View MSA
122797725 5272 Eudicot View MSA
122048583 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.864893 0.0 2.31255    
cufflinks 13.2314 0.0 29.2722   High
cufflinks 0.861143 0.0 2.29047    
cufflinks 5.90003 0.0 13.2314    
cufflinks 2.12814 0.0 5.18041    
cufflinks 0.413575 0.0 1.20169 Low Low

0 Strain