Gene : Eucgr.H02090 E. grandis v2.0
Defline:  (1 of 16) PTHR12419:SF7 - OTU DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  1631
Name:  ? Eucgr.H02090 Secondary Identifier:  ? PAC:32045259
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02090 0.5kb upstream 0.5kb upstream 5690 true Chr08: 25825895-25831584 Eucalyptus grandis
Eucgr.H02090 0.5kb upstream 0.5kb upstream 500 false Chr08: 25825895-25826394 Eucalyptus grandis
Eucgr.H02090 0.5kb downstream 0.5kb downstream 5690 true Chr08: 25826395-25832084 Eucalyptus grandis
Eucgr.H02090 0.5kb downstream 0.5kb downstream 500 false Chr08: 25831585-25832084 Eucalyptus grandis
Eucgr.H02090 1.0kb upstream 1.0kb upstream 6190 true Chr08: 25825395-25831584 Eucalyptus grandis
Eucgr.H02090 1.0kb upstream 1.0kb upstream 1000 false Chr08: 25825395-25826394 Eucalyptus grandis
Eucgr.H02090 1.0kb downstream 1.0kb downstream 6190 true Chr08: 25826395-25832584 Eucalyptus grandis
Eucgr.H02090 1.0kb downstream 1.0kb downstream 1000 false Chr08: 25831585-25832584 Eucalyptus grandis
Eucgr.H02090 2.0kb upstream 2.0kb upstream 7190 true Chr08: 25824395-25831584 Eucalyptus grandis
Eucgr.H02090 2.0kb upstream 2.0kb upstream 2000 false Chr08: 25824395-25826394 Eucalyptus grandis
Eucgr.H02090 2.0kb downstream 2.0kb downstream 7190 true Chr08: 25826395-25833584 Eucalyptus grandis
Eucgr.H02090 2.0kb downstream 2.0kb downstream 2000 false Chr08: 25831585-25833584 Eucalyptus grandis
Eucgr.H02090 5.0kb upstream 5.0kb upstream 10190 true Chr08: 25821395-25831584 Eucalyptus grandis
Eucgr.H02090 5.0kb upstream 5.0kb upstream 5000 false Chr08: 25821395-25826394 Eucalyptus grandis
Eucgr.H02090 5.0kb downstream 5.0kb downstream 10190 true Chr08: 25826395-25836584 Eucalyptus grandis
Eucgr.H02090 5.0kb downstream 5.0kb downstream 5000 false Chr08: 25831585-25836584 Eucalyptus grandis
Eucgr.H02090 10.0kb upstream 10.0kb upstream 15190 true Chr08: 25816395-25831584 Eucalyptus grandis
Eucgr.H02090 10.0kb upstream 10.0kb upstream 10000 false Chr08: 25816395-25826394 Eucalyptus grandis
Eucgr.H02090 10.0kb downstream 10.0kb downstream 15190 true Chr08: 25826395-25841584 Eucalyptus grandis
Eucgr.H02090 10.0kb downstream 10.0kb downstream 10000 false Chr08: 25831585-25841584 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124045658 5270 Rosid Singleton cluster - no MSA
123745546 5271 Pentapetalae View MSA
122787389 5272 Eudicot View MSA
122041608 5273 Angiosperm View MSA
121347051 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.529342 0.0 1.72995    
cufflinks 1.65653 0.0 4.68958    
cufflinks 1.3804 0.0 3.99737    
cufflinks 0.362156 0.0 1.23098 Low Low
cufflinks 2.3042 0.0 6.33119   High
cufflinks 0.643214 0.0 2.06862 Low  

0 Strain