Gene : Eucgr.H01949 E. grandis v2.0
Defline:  (1 of 4) KOG4249 - Uncharacterized conserved protein Genomic Order:  1404
Name:  ? Eucgr.H01949 Secondary Identifier:  ? PAC:32043133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01949 0.5kb upstream 0.5kb upstream 4998 true Chr08: 20242489-20247486 Eucalyptus grandis
Eucgr.H01949 0.5kb upstream 0.5kb upstream 500 false Chr08: 20246987-20247486 Eucalyptus grandis
Eucgr.H01949 0.5kb downstream 0.5kb downstream 4998 true Chr08: 20241989-20246986 Eucalyptus grandis
Eucgr.H01949 0.5kb downstream 0.5kb downstream 500 false Chr08: 20241989-20242488 Eucalyptus grandis
Eucgr.H01949 1.0kb upstream 1.0kb upstream 5498 true Chr08: 20242489-20247986 Eucalyptus grandis
Eucgr.H01949 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20246987-20247986 Eucalyptus grandis
Eucgr.H01949 1.0kb downstream 1.0kb downstream 5498 true Chr08: 20241489-20246986 Eucalyptus grandis
Eucgr.H01949 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20241489-20242488 Eucalyptus grandis
Eucgr.H01949 2.0kb upstream 2.0kb upstream 6498 true Chr08: 20242489-20248986 Eucalyptus grandis
Eucgr.H01949 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20246987-20248986 Eucalyptus grandis
Eucgr.H01949 2.0kb downstream 2.0kb downstream 6498 true Chr08: 20240489-20246986 Eucalyptus grandis
Eucgr.H01949 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20240489-20242488 Eucalyptus grandis
Eucgr.H01949 5.0kb upstream 5.0kb upstream 9498 true Chr08: 20242489-20251986 Eucalyptus grandis
Eucgr.H01949 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20246987-20251986 Eucalyptus grandis
Eucgr.H01949 5.0kb downstream 5.0kb downstream 9498 true Chr08: 20237489-20246986 Eucalyptus grandis
Eucgr.H01949 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20237489-20242488 Eucalyptus grandis
Eucgr.H01949 10.0kb upstream 10.0kb upstream 14498 true Chr08: 20242489-20256986 Eucalyptus grandis
Eucgr.H01949 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20246987-20256986 Eucalyptus grandis
Eucgr.H01949 10.0kb downstream 10.0kb downstream 14498 true Chr08: 20232489-20246986 Eucalyptus grandis
Eucgr.H01949 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20232489-20242488 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067198 5270 Rosid View MSA
123740356 5271 Pentapetalae View MSA
122792497 5272 Eudicot View MSA
122041565 5273 Angiosperm View MSA
121347717 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.77966 0.0 7.32034   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.50872 0.0 4.22187    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.22752 0.0 3.50959    
cufflinks 1.3782 0.0 3.89996    

0 Strain