Gene : Eucgr.H01939 E. grandis v2.0
Defline:  (1 of 28) PF03000 - NPH3 family (NPH3) Genomic Order:  1394
Name:  ? Eucgr.H01939 Secondary Identifier:  ? PAC:32041752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01939 0.5kb upstream 0.5kb upstream 3563 true Chr08: 20130827-20134389 Eucalyptus grandis
Eucgr.H01939 0.5kb upstream 0.5kb upstream 500 false Chr08: 20133890-20134389 Eucalyptus grandis
Eucgr.H01939 0.5kb downstream 0.5kb downstream 3563 true Chr08: 20130327-20133889 Eucalyptus grandis
Eucgr.H01939 0.5kb downstream 0.5kb downstream 500 false Chr08: 20130327-20130826 Eucalyptus grandis
Eucgr.H01939 1.0kb upstream 1.0kb upstream 4063 true Chr08: 20130827-20134889 Eucalyptus grandis
Eucgr.H01939 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20133890-20134889 Eucalyptus grandis
Eucgr.H01939 1.0kb downstream 1.0kb downstream 4063 true Chr08: 20129827-20133889 Eucalyptus grandis
Eucgr.H01939 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20129827-20130826 Eucalyptus grandis
Eucgr.H01939 2.0kb upstream 2.0kb upstream 5063 true Chr08: 20130827-20135889 Eucalyptus grandis
Eucgr.H01939 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20133890-20135889 Eucalyptus grandis
Eucgr.H01939 2.0kb downstream 2.0kb downstream 5063 true Chr08: 20128827-20133889 Eucalyptus grandis
Eucgr.H01939 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20128827-20130826 Eucalyptus grandis
Eucgr.H01939 5.0kb upstream 5.0kb upstream 8063 true Chr08: 20130827-20138889 Eucalyptus grandis
Eucgr.H01939 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20133890-20138889 Eucalyptus grandis
Eucgr.H01939 5.0kb downstream 5.0kb downstream 8063 true Chr08: 20125827-20133889 Eucalyptus grandis
Eucgr.H01939 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20125827-20130826 Eucalyptus grandis
Eucgr.H01939 10.0kb upstream 10.0kb upstream 13063 true Chr08: 20130827-20143889 Eucalyptus grandis
Eucgr.H01939 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20133890-20143889 Eucalyptus grandis
Eucgr.H01939 10.0kb downstream 10.0kb downstream 13063 true Chr08: 20120827-20133889 Eucalyptus grandis
Eucgr.H01939 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20120827-20130826 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062136 5270 Rosid View MSA
123740597 5271 Pentapetalae View MSA
122793166 5272 Eudicot View MSA
122048903 5273 Angiosperm View MSA
121311163 5274 Embryophyte View MSA
123348497 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.65178 0.0 21.7043    
cufflinks 11.4618 0.0 25.7203   High
cufflinks 3.47409 0.0 8.56316   Low
cufflinks 8.96797 0.0 20.4322    
cufflinks 5.72225 0.0 13.4432    
cufflinks 6.05274 0.0 13.9071    

0 Strain