Gene : Eucgr.H02885 E. grandis v2.0
Defline:  (1 of 6) 3.4.21.102 - C-terminal processing peptidase / Tsp protease Genomic Order:  2256
Name:  ? Eucgr.H02885 Secondary Identifier:  ? PAC:32042188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02885 0.5kb upstream 0.5kb upstream 5334 true Chr08: 40507966-40513299 Eucalyptus grandis
Eucgr.H02885 0.5kb upstream 0.5kb upstream 500 false Chr08: 40512800-40513299 Eucalyptus grandis
Eucgr.H02885 0.5kb downstream 0.5kb downstream 5334 true Chr08: 40507466-40512799 Eucalyptus grandis
Eucgr.H02885 0.5kb downstream 0.5kb downstream 500 false Chr08: 40507466-40507965 Eucalyptus grandis
Eucgr.H02885 1.0kb upstream 1.0kb upstream 5834 true Chr08: 40507966-40513799 Eucalyptus grandis
Eucgr.H02885 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40512800-40513799 Eucalyptus grandis
Eucgr.H02885 1.0kb downstream 1.0kb downstream 5834 true Chr08: 40506966-40512799 Eucalyptus grandis
Eucgr.H02885 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40506966-40507965 Eucalyptus grandis
Eucgr.H02885 2.0kb upstream 2.0kb upstream 6834 true Chr08: 40507966-40514799 Eucalyptus grandis
Eucgr.H02885 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40512800-40514799 Eucalyptus grandis
Eucgr.H02885 2.0kb downstream 2.0kb downstream 6834 true Chr08: 40505966-40512799 Eucalyptus grandis
Eucgr.H02885 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40505966-40507965 Eucalyptus grandis
Eucgr.H02885 5.0kb upstream 5.0kb upstream 9834 true Chr08: 40507966-40517799 Eucalyptus grandis
Eucgr.H02885 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40512800-40517799 Eucalyptus grandis
Eucgr.H02885 5.0kb downstream 5.0kb downstream 9834 true Chr08: 40502966-40512799 Eucalyptus grandis
Eucgr.H02885 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40502966-40507965 Eucalyptus grandis
Eucgr.H02885 10.0kb upstream 10.0kb upstream 14834 true Chr08: 40507966-40522799 Eucalyptus grandis
Eucgr.H02885 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40512800-40522799 Eucalyptus grandis
Eucgr.H02885 10.0kb downstream 10.0kb downstream 14834 true Chr08: 40497966-40512799 Eucalyptus grandis
Eucgr.H02885 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40497966-40507965 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060968 5270 Rosid View MSA
123750616 5271 Pentapetalae View MSA
122792134 5272 Eudicot View MSA
122042962 5273 Angiosperm View MSA
121346288 5274 Embryophyte View MSA
123424698 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.56218 0.0 9.13287    
cufflinks 2.9297 0.0 7.62728    
cufflinks 3.28485 0.0 8.47225    
cufflinks 1.2792 0.0 3.6123    
cufflinks 1.17332 0.0 3.35464   Low
cufflinks 11.1752 0.0 25.7515   High

0 Strain