Gene : Eucgr.H02888 E. grandis v2.0
Defline:  (1 of 1) PTHR24031:SF91 - ATP-DEPENDENT RNA HELICASE DDX24 Genomic Order:  2259
Name:  ? Eucgr.H02888 Secondary Identifier:  ? PAC:32041155
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02888 0.5kb upstream 0.5kb upstream 11454 true Chr08: 40560149-40571602 Eucalyptus grandis
Eucgr.H02888 0.5kb upstream 0.5kb upstream 500 false Chr08: 40571103-40571602 Eucalyptus grandis
Eucgr.H02888 0.5kb downstream 0.5kb downstream 11454 true Chr08: 40559649-40571102 Eucalyptus grandis
Eucgr.H02888 0.5kb downstream 0.5kb downstream 500 false Chr08: 40559649-40560148 Eucalyptus grandis
Eucgr.H02888 1.0kb upstream 1.0kb upstream 11954 true Chr08: 40560149-40572102 Eucalyptus grandis
Eucgr.H02888 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40571103-40572102 Eucalyptus grandis
Eucgr.H02888 1.0kb downstream 1.0kb downstream 11954 true Chr08: 40559149-40571102 Eucalyptus grandis
Eucgr.H02888 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40559149-40560148 Eucalyptus grandis
Eucgr.H02888 2.0kb upstream 2.0kb upstream 12954 true Chr08: 40560149-40573102 Eucalyptus grandis
Eucgr.H02888 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40571103-40573102 Eucalyptus grandis
Eucgr.H02888 2.0kb downstream 2.0kb downstream 12954 true Chr08: 40558149-40571102 Eucalyptus grandis
Eucgr.H02888 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40558149-40560148 Eucalyptus grandis
Eucgr.H02888 5.0kb upstream 5.0kb upstream 15954 true Chr08: 40560149-40576102 Eucalyptus grandis
Eucgr.H02888 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40571103-40576102 Eucalyptus grandis
Eucgr.H02888 5.0kb downstream 5.0kb downstream 15954 true Chr08: 40555149-40571102 Eucalyptus grandis
Eucgr.H02888 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40555149-40560148 Eucalyptus grandis
Eucgr.H02888 10.0kb upstream 10.0kb upstream 20954 true Chr08: 40560149-40581102 Eucalyptus grandis
Eucgr.H02888 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40571103-40581102 Eucalyptus grandis
Eucgr.H02888 10.0kb downstream 10.0kb downstream 20954 true Chr08: 40550149-40571102 Eucalyptus grandis
Eucgr.H02888 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40550149-40560148 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041287 5273 Angiosperm View MSA
124063996 5270 Rosid View MSA
123738891 5271 Pentapetalae View MSA
122787114 5272 Eudicot View MSA
121349262 5274 Embryophyte View MSA
123425177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.27278 0.0 14.9795   High
cufflinks 5.02647 0.0 11.6668    
cufflinks 4.72741 0.0 11.0299    
cufflinks 2.69999 0.0 6.70958   Low
cufflinks 3.29139 0.0 7.94984    
cufflinks 4.58331 0.0 10.758    

0 Strain