Gene : Eucgr.H02881 E. grandis v2.0
Defline:  (1 of 2) PTHR22874:SF4 - TRANSDUCIN/WD-40 REPEAT-CONTAINING PROTEIN-RELATED Genomic Order:  2252
Name:  ? Eucgr.H02881 Secondary Identifier:  ? PAC:32044253
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02881 0.5kb upstream 0.5kb upstream 10703 true Chr08: 40482270-40492972 Eucalyptus grandis
Eucgr.H02881 0.5kb upstream 0.5kb upstream 500 false Chr08: 40482270-40482769 Eucalyptus grandis
Eucgr.H02881 0.5kb downstream 0.5kb downstream 10703 true Chr08: 40482770-40493472 Eucalyptus grandis
Eucgr.H02881 0.5kb downstream 0.5kb downstream 500 false Chr08: 40492973-40493472 Eucalyptus grandis
Eucgr.H02881 1.0kb upstream 1.0kb upstream 11203 true Chr08: 40481770-40492972 Eucalyptus grandis
Eucgr.H02881 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40481770-40482769 Eucalyptus grandis
Eucgr.H02881 1.0kb downstream 1.0kb downstream 11203 true Chr08: 40482770-40493972 Eucalyptus grandis
Eucgr.H02881 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40492973-40493972 Eucalyptus grandis
Eucgr.H02881 2.0kb upstream 2.0kb upstream 12203 true Chr08: 40480770-40492972 Eucalyptus grandis
Eucgr.H02881 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40480770-40482769 Eucalyptus grandis
Eucgr.H02881 2.0kb downstream 2.0kb downstream 12203 true Chr08: 40482770-40494972 Eucalyptus grandis
Eucgr.H02881 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40492973-40494972 Eucalyptus grandis
Eucgr.H02881 5.0kb upstream 5.0kb upstream 15203 true Chr08: 40477770-40492972 Eucalyptus grandis
Eucgr.H02881 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40477770-40482769 Eucalyptus grandis
Eucgr.H02881 5.0kb downstream 5.0kb downstream 15203 true Chr08: 40482770-40497972 Eucalyptus grandis
Eucgr.H02881 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40492973-40497972 Eucalyptus grandis
Eucgr.H02881 10.0kb upstream 10.0kb upstream 20203 true Chr08: 40472770-40492972 Eucalyptus grandis
Eucgr.H02881 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40472770-40482769 Eucalyptus grandis
Eucgr.H02881 10.0kb downstream 10.0kb downstream 20203 true Chr08: 40482770-40502972 Eucalyptus grandis
Eucgr.H02881 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40492973-40502972 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072284 5270 Rosid View MSA
123744540 5271 Pentapetalae View MSA
122788668 5272 Eudicot View MSA
122045725 5273 Angiosperm View MSA
121344183 5274 Embryophyte View MSA
123426396 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6149 0.0 33.0375    
cufflinks 24.1037 0.0 63.8292    
cufflinks 16.0846 0.0 41.3057    
cufflinks 44.2036 0.0 117.061 High High
cufflinks 10.8762 0.0 24.6168   Low
cufflinks 17.6475 0.0 47.8636    

0 Strain