Gene : Eucgr.H02859 E. grandis v2.0
Defline:  (1 of 4) 6.3.5.7 - Glutaminyl-tRNA synthase (glutamine-hydrolyzing) / Glutamyl-tRNA(Gln) amidotransferase Genomic Order:  2234
Name:  ? Eucgr.H02859 Secondary Identifier:  ? PAC:32040950
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5921 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02859 0.5kb upstream 0.5kb upstream 5717 true Chr08: 39940166-39945882 Eucalyptus grandis
Eucgr.H02859 0.5kb upstream 0.5kb upstream 500 false Chr08: 39945383-39945882 Eucalyptus grandis
Eucgr.H02859 0.5kb downstream 0.5kb downstream 5717 true Chr08: 39939666-39945382 Eucalyptus grandis
Eucgr.H02859 0.5kb downstream 0.5kb downstream 500 false Chr08: 39939666-39940165 Eucalyptus grandis
Eucgr.H02859 1.0kb upstream 1.0kb upstream 6217 true Chr08: 39940166-39946382 Eucalyptus grandis
Eucgr.H02859 1.0kb upstream 1.0kb upstream 1000 false Chr08: 39945383-39946382 Eucalyptus grandis
Eucgr.H02859 1.0kb downstream 1.0kb downstream 6217 true Chr08: 39939166-39945382 Eucalyptus grandis
Eucgr.H02859 1.0kb downstream 1.0kb downstream 1000 false Chr08: 39939166-39940165 Eucalyptus grandis
Eucgr.H02859 2.0kb upstream 2.0kb upstream 7217 true Chr08: 39940166-39947382 Eucalyptus grandis
Eucgr.H02859 2.0kb upstream 2.0kb upstream 2000 false Chr08: 39945383-39947382 Eucalyptus grandis
Eucgr.H02859 2.0kb downstream 2.0kb downstream 7217 true Chr08: 39938166-39945382 Eucalyptus grandis
Eucgr.H02859 2.0kb downstream 2.0kb downstream 2000 false Chr08: 39938166-39940165 Eucalyptus grandis
Eucgr.H02859 5.0kb upstream 5.0kb upstream 10217 true Chr08: 39940166-39950382 Eucalyptus grandis
Eucgr.H02859 5.0kb upstream 5.0kb upstream 5000 false Chr08: 39945383-39950382 Eucalyptus grandis
Eucgr.H02859 5.0kb downstream 5.0kb downstream 10217 true Chr08: 39935166-39945382 Eucalyptus grandis
Eucgr.H02859 5.0kb downstream 5.0kb downstream 5000 false Chr08: 39935166-39940165 Eucalyptus grandis
Eucgr.H02859 10.0kb upstream 10.0kb upstream 15217 true Chr08: 39940166-39955382 Eucalyptus grandis
Eucgr.H02859 10.0kb upstream 10.0kb upstream 10000 false Chr08: 39945383-39955382 Eucalyptus grandis
Eucgr.H02859 10.0kb downstream 10.0kb downstream 15217 true Chr08: 39930166-39945382 Eucalyptus grandis
Eucgr.H02859 10.0kb downstream 10.0kb downstream 10000 false Chr08: 39930166-39940165 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.49212 0.0 8.74198    
cufflinks 6.03334 0.0 14.2257   High
cufflinks 2.90716 0.0 7.3865    
cufflinks 1.60564 0.0 4.30359    
cufflinks 1.43755 0.0 3.91232    
cufflinks 1.28471 0.0 3.58721   Low

0 Strain