Gene : Eucgr.H02783 E. grandis v2.0
Defline:  (1 of 5) PTHR10891:SF574 - CALCIUM-BINDING PROTEIN CML30-RELATED Genomic Order:  2175
Name:  ? Eucgr.H02783 Secondary Identifier:  ? PAC:32042721
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02783 0.5kb upstream 0.5kb upstream 1954 true Chr08: 38550391-38552344 Eucalyptus grandis
Eucgr.H02783 0.5kb upstream 0.5kb upstream 500 false Chr08: 38551845-38552344 Eucalyptus grandis
Eucgr.H02783 0.5kb downstream 0.5kb downstream 1954 true Chr08: 38549891-38551844 Eucalyptus grandis
Eucgr.H02783 0.5kb downstream 0.5kb downstream 500 false Chr08: 38549891-38550390 Eucalyptus grandis
Eucgr.H02783 1.0kb upstream 1.0kb upstream 2454 true Chr08: 38550391-38552844 Eucalyptus grandis
Eucgr.H02783 1.0kb upstream 1.0kb upstream 1000 false Chr08: 38551845-38552844 Eucalyptus grandis
Eucgr.H02783 1.0kb downstream 1.0kb downstream 2454 true Chr08: 38549391-38551844 Eucalyptus grandis
Eucgr.H02783 1.0kb downstream 1.0kb downstream 1000 false Chr08: 38549391-38550390 Eucalyptus grandis
Eucgr.H02783 2.0kb upstream 2.0kb upstream 3454 true Chr08: 38550391-38553844 Eucalyptus grandis
Eucgr.H02783 2.0kb upstream 2.0kb upstream 2000 false Chr08: 38551845-38553844 Eucalyptus grandis
Eucgr.H02783 2.0kb downstream 2.0kb downstream 3454 true Chr08: 38548391-38551844 Eucalyptus grandis
Eucgr.H02783 2.0kb downstream 2.0kb downstream 2000 false Chr08: 38548391-38550390 Eucalyptus grandis
Eucgr.H02783 5.0kb upstream 5.0kb upstream 6454 true Chr08: 38550391-38556844 Eucalyptus grandis
Eucgr.H02783 5.0kb upstream 5.0kb upstream 5000 false Chr08: 38551845-38556844 Eucalyptus grandis
Eucgr.H02783 5.0kb downstream 5.0kb downstream 6454 true Chr08: 38545391-38551844 Eucalyptus grandis
Eucgr.H02783 5.0kb downstream 5.0kb downstream 5000 false Chr08: 38545391-38550390 Eucalyptus grandis
Eucgr.H02783 10.0kb upstream 10.0kb upstream 11454 true Chr08: 38550391-38561844 Eucalyptus grandis
Eucgr.H02783 10.0kb upstream 10.0kb upstream 10000 false Chr08: 38551845-38561844 Eucalyptus grandis
Eucgr.H02783 10.0kb downstream 10.0kb downstream 11454 true Chr08: 38540391-38551844 Eucalyptus grandis
Eucgr.H02783 10.0kb downstream 10.0kb downstream 10000 false Chr08: 38540391-38550390 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026671 5273 Angiosperm View MSA
124069517 5270 Rosid View MSA
123745725 5271 Pentapetalae View MSA
122794659 5272 Eudicot View MSA
121296467 5274 Embryophyte View MSA
123425898 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.870461 0.0 2.96563    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.396266 0.0 1.49302 Low  
cufflinks 2.63501 0.0 7.77336   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain