Gene : Eucgr.H02736 E. grandis v2.0
Defline:  (1 of 3) PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Genomic Order:  2138
Name:  ? Eucgr.H02736 Secondary Identifier:  ? PAC:32044902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02736 0.5kb upstream 0.5kb upstream 4021 true Chr08: 37492690-37496710 Eucalyptus grandis
Eucgr.H02736 0.5kb upstream 0.5kb upstream 500 false Chr08: 37496211-37496710 Eucalyptus grandis
Eucgr.H02736 0.5kb downstream 0.5kb downstream 4021 true Chr08: 37492190-37496210 Eucalyptus grandis
Eucgr.H02736 0.5kb downstream 0.5kb downstream 500 false Chr08: 37492190-37492689 Eucalyptus grandis
Eucgr.H02736 1.0kb upstream 1.0kb upstream 4521 true Chr08: 37492690-37497210 Eucalyptus grandis
Eucgr.H02736 1.0kb upstream 1.0kb upstream 1000 false Chr08: 37496211-37497210 Eucalyptus grandis
Eucgr.H02736 1.0kb downstream 1.0kb downstream 4521 true Chr08: 37491690-37496210 Eucalyptus grandis
Eucgr.H02736 1.0kb downstream 1.0kb downstream 1000 false Chr08: 37491690-37492689 Eucalyptus grandis
Eucgr.H02736 2.0kb upstream 2.0kb upstream 5521 true Chr08: 37492690-37498210 Eucalyptus grandis
Eucgr.H02736 2.0kb upstream 2.0kb upstream 2000 false Chr08: 37496211-37498210 Eucalyptus grandis
Eucgr.H02736 2.0kb downstream 2.0kb downstream 5521 true Chr08: 37490690-37496210 Eucalyptus grandis
Eucgr.H02736 2.0kb downstream 2.0kb downstream 2000 false Chr08: 37490690-37492689 Eucalyptus grandis
Eucgr.H02736 5.0kb upstream 5.0kb upstream 8521 true Chr08: 37492690-37501210 Eucalyptus grandis
Eucgr.H02736 5.0kb upstream 5.0kb upstream 5000 false Chr08: 37496211-37501210 Eucalyptus grandis
Eucgr.H02736 5.0kb downstream 5.0kb downstream 8521 true Chr08: 37487690-37496210 Eucalyptus grandis
Eucgr.H02736 5.0kb downstream 5.0kb downstream 5000 false Chr08: 37487690-37492689 Eucalyptus grandis
Eucgr.H02736 10.0kb upstream 10.0kb upstream 13521 true Chr08: 37492690-37506210 Eucalyptus grandis
Eucgr.H02736 10.0kb upstream 10.0kb upstream 10000 false Chr08: 37496211-37506210 Eucalyptus grandis
Eucgr.H02736 10.0kb downstream 10.0kb downstream 13521 true Chr08: 37482690-37496210 Eucalyptus grandis
Eucgr.H02736 10.0kb downstream 10.0kb downstream 10000 false Chr08: 37482690-37492689 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072266 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.44823 0.0 21.8867    
cufflinks 4.51551 0.0 11.2321   Low
cufflinks 11.2279 0.0 25.6933   High
cufflinks 5.99504 0.0 14.4741    
cufflinks 5.48208 0.0 13.3365    
cufflinks 9.37338 0.0 21.7394    

0 Strain