Gene : Eucgr.H02737 E. grandis v2.0
Defline:  (1 of 3) PTHR11581 - 30S/40S RIBOSOMAL PROTEIN S4 Genomic Order:  2139
Name:  ? Eucgr.H02737 Secondary Identifier:  ? PAC:32043401
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02737 0.5kb upstream 0.5kb upstream 2918 true Chr08: 37498603-37501520 Eucalyptus grandis
Eucgr.H02737 0.5kb upstream 0.5kb upstream 500 false Chr08: 37498603-37499102 Eucalyptus grandis
Eucgr.H02737 0.5kb downstream 0.5kb downstream 2918 true Chr08: 37499103-37502020 Eucalyptus grandis
Eucgr.H02737 0.5kb downstream 0.5kb downstream 500 false Chr08: 37501521-37502020 Eucalyptus grandis
Eucgr.H02737 1.0kb upstream 1.0kb upstream 3418 true Chr08: 37498103-37501520 Eucalyptus grandis
Eucgr.H02737 1.0kb upstream 1.0kb upstream 1000 false Chr08: 37498103-37499102 Eucalyptus grandis
Eucgr.H02737 1.0kb downstream 1.0kb downstream 3418 true Chr08: 37499103-37502520 Eucalyptus grandis
Eucgr.H02737 1.0kb downstream 1.0kb downstream 1000 false Chr08: 37501521-37502520 Eucalyptus grandis
Eucgr.H02737 2.0kb upstream 2.0kb upstream 4418 true Chr08: 37497103-37501520 Eucalyptus grandis
Eucgr.H02737 2.0kb upstream 2.0kb upstream 2000 false Chr08: 37497103-37499102 Eucalyptus grandis
Eucgr.H02737 2.0kb downstream 2.0kb downstream 4418 true Chr08: 37499103-37503520 Eucalyptus grandis
Eucgr.H02737 2.0kb downstream 2.0kb downstream 2000 false Chr08: 37501521-37503520 Eucalyptus grandis
Eucgr.H02737 5.0kb upstream 5.0kb upstream 7418 true Chr08: 37494103-37501520 Eucalyptus grandis
Eucgr.H02737 5.0kb upstream 5.0kb upstream 5000 false Chr08: 37494103-37499102 Eucalyptus grandis
Eucgr.H02737 5.0kb downstream 5.0kb downstream 7418 true Chr08: 37499103-37506520 Eucalyptus grandis
Eucgr.H02737 5.0kb downstream 5.0kb downstream 5000 false Chr08: 37501521-37506520 Eucalyptus grandis
Eucgr.H02737 10.0kb upstream 10.0kb upstream 12418 true Chr08: 37489103-37501520 Eucalyptus grandis
Eucgr.H02737 10.0kb upstream 10.0kb upstream 10000 false Chr08: 37489103-37499102 Eucalyptus grandis
Eucgr.H02737 10.0kb downstream 10.0kb downstream 12418 true Chr08: 37499103-37511520 Eucalyptus grandis
Eucgr.H02737 10.0kb downstream 10.0kb downstream 10000 false Chr08: 37501521-37511520 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070579 5270 Rosid View MSA
123750810 5271 Pentapetalae View MSA
122793916 5272 Eudicot View MSA
122046993 5273 Angiosperm View MSA
121344969 5274 Embryophyte View MSA
123426872 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 121.46 0.0 344.86 High  
cufflinks 56.0819 0.0 128.377 High Low
cufflinks 97.5651 0.0 267.338 High  
cufflinks 95.0231 0.0 226.361 High  
cufflinks 155.274 0.0 361.471 High High
cufflinks 114.118 0.0 259.295 High  

0 Strain