Gene : Eucgr.H02608 E. grandis v2.0
Defline:  (1 of 2) PTHR31458:SF3 - POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  2026
Name:  ? Eucgr.H02608 Secondary Identifier:  ? PAC:32045126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02608 0.5kb upstream 0.5kb upstream 2963 true Chr08: 35083814-35086776 Eucalyptus grandis
Eucgr.H02608 0.5kb upstream 0.5kb upstream 500 false Chr08: 35083814-35084313 Eucalyptus grandis
Eucgr.H02608 0.5kb downstream 0.5kb downstream 2963 true Chr08: 35084314-35087276 Eucalyptus grandis
Eucgr.H02608 0.5kb downstream 0.5kb downstream 500 false Chr08: 35086777-35087276 Eucalyptus grandis
Eucgr.H02608 1.0kb upstream 1.0kb upstream 3463 true Chr08: 35083314-35086776 Eucalyptus grandis
Eucgr.H02608 1.0kb upstream 1.0kb upstream 1000 false Chr08: 35083314-35084313 Eucalyptus grandis
Eucgr.H02608 1.0kb downstream 1.0kb downstream 3463 true Chr08: 35084314-35087776 Eucalyptus grandis
Eucgr.H02608 1.0kb downstream 1.0kb downstream 1000 false Chr08: 35086777-35087776 Eucalyptus grandis
Eucgr.H02608 2.0kb upstream 2.0kb upstream 4463 true Chr08: 35082314-35086776 Eucalyptus grandis
Eucgr.H02608 2.0kb upstream 2.0kb upstream 2000 false Chr08: 35082314-35084313 Eucalyptus grandis
Eucgr.H02608 2.0kb downstream 2.0kb downstream 4463 true Chr08: 35084314-35088776 Eucalyptus grandis
Eucgr.H02608 2.0kb downstream 2.0kb downstream 2000 false Chr08: 35086777-35088776 Eucalyptus grandis
Eucgr.H02608 5.0kb upstream 5.0kb upstream 7463 true Chr08: 35079314-35086776 Eucalyptus grandis
Eucgr.H02608 5.0kb upstream 5.0kb upstream 5000 false Chr08: 35079314-35084313 Eucalyptus grandis
Eucgr.H02608 5.0kb downstream 5.0kb downstream 7463 true Chr08: 35084314-35091776 Eucalyptus grandis
Eucgr.H02608 5.0kb downstream 5.0kb downstream 5000 false Chr08: 35086777-35091776 Eucalyptus grandis
Eucgr.H02608 10.0kb upstream 10.0kb upstream 12463 true Chr08: 35074314-35086776 Eucalyptus grandis
Eucgr.H02608 10.0kb upstream 10.0kb upstream 10000 false Chr08: 35074314-35084313 Eucalyptus grandis
Eucgr.H02608 10.0kb downstream 10.0kb downstream 12463 true Chr08: 35084314-35096776 Eucalyptus grandis
Eucgr.H02608 10.0kb downstream 10.0kb downstream 10000 false Chr08: 35086777-35096776 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.239 0.0 120.032 High  
cufflinks 174.571 0.0 430.833 High  
cufflinks 41.6079 0.0 92.5645 High Low
cufflinks 159.132 0.0 386.942 High  
cufflinks 220.055 0.0 559.551 High High
cufflinks 56.2168 0.0 127.67 High  

0 Strain