Gene : Eucgr.H02616 E. grandis v2.0
Defline:  (1 of 1) PTHR13904 - PRE-MRNA SPLICING FACTOR PRP31 Genomic Order:  2034
Name:  ? Eucgr.H02616 Secondary Identifier:  ? PAC:32042379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02616 0.5kb upstream 0.5kb upstream 13499 true Chr08: 35183833-35197331 Eucalyptus grandis
Eucgr.H02616 0.5kb upstream 0.5kb upstream 500 false Chr08: 35183833-35184332 Eucalyptus grandis
Eucgr.H02616 0.5kb downstream 0.5kb downstream 13499 true Chr08: 35184333-35197831 Eucalyptus grandis
Eucgr.H02616 0.5kb downstream 0.5kb downstream 500 false Chr08: 35197332-35197831 Eucalyptus grandis
Eucgr.H02616 1.0kb upstream 1.0kb upstream 13999 true Chr08: 35183333-35197331 Eucalyptus grandis
Eucgr.H02616 1.0kb upstream 1.0kb upstream 1000 false Chr08: 35183333-35184332 Eucalyptus grandis
Eucgr.H02616 1.0kb downstream 1.0kb downstream 13999 true Chr08: 35184333-35198331 Eucalyptus grandis
Eucgr.H02616 1.0kb downstream 1.0kb downstream 1000 false Chr08: 35197332-35198331 Eucalyptus grandis
Eucgr.H02616 2.0kb upstream 2.0kb upstream 14999 true Chr08: 35182333-35197331 Eucalyptus grandis
Eucgr.H02616 2.0kb upstream 2.0kb upstream 2000 false Chr08: 35182333-35184332 Eucalyptus grandis
Eucgr.H02616 2.0kb downstream 2.0kb downstream 14999 true Chr08: 35184333-35199331 Eucalyptus grandis
Eucgr.H02616 2.0kb downstream 2.0kb downstream 2000 false Chr08: 35197332-35199331 Eucalyptus grandis
Eucgr.H02616 5.0kb upstream 5.0kb upstream 17999 true Chr08: 35179333-35197331 Eucalyptus grandis
Eucgr.H02616 5.0kb upstream 5.0kb upstream 5000 false Chr08: 35179333-35184332 Eucalyptus grandis
Eucgr.H02616 5.0kb downstream 5.0kb downstream 17999 true Chr08: 35184333-35202331 Eucalyptus grandis
Eucgr.H02616 5.0kb downstream 5.0kb downstream 5000 false Chr08: 35197332-35202331 Eucalyptus grandis
Eucgr.H02616 10.0kb upstream 10.0kb upstream 22999 true Chr08: 35174333-35197331 Eucalyptus grandis
Eucgr.H02616 10.0kb upstream 10.0kb upstream 10000 false Chr08: 35174333-35184332 Eucalyptus grandis
Eucgr.H02616 10.0kb downstream 10.0kb downstream 22999 true Chr08: 35184333-35207331 Eucalyptus grandis
Eucgr.H02616 10.0kb downstream 10.0kb downstream 10000 false Chr08: 35197332-35207331 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062587 5270 Rosid View MSA
123753460 5271 Pentapetalae View MSA
122792370 5272 Eudicot View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.4444 0.0 71.7147 High High
cufflinks 18.3706 0.0 41.373   Low
cufflinks 24.3925 0.0 60.1793    
cufflinks 22.0123 0.0 55.391    
cufflinks 27.4748 0.0 69.0598    
cufflinks 23.2638 0.0 62.3694    

0 Strain