Gene : Eucgr.H02592 E. grandis v2.0
Defline:  (1 of 2) PF00578//PF07649//PF13905 - AhpC/TSA family (AhpC-TSA) // C1-like domain (C1_3) // Thioredoxin-like (Thioredoxin_8) Genomic Order:  2013
Name:  ? Eucgr.H02592 Secondary Identifier:  ? PAC:32043921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02592 0.5kb upstream 0.5kb upstream 3394 true Chr08: 34868011-34871404 Eucalyptus grandis
Eucgr.H02592 0.5kb upstream 0.5kb upstream 500 false Chr08: 34870905-34871404 Eucalyptus grandis
Eucgr.H02592 0.5kb downstream 0.5kb downstream 3394 true Chr08: 34867511-34870904 Eucalyptus grandis
Eucgr.H02592 0.5kb downstream 0.5kb downstream 500 false Chr08: 34867511-34868010 Eucalyptus grandis
Eucgr.H02592 1.0kb upstream 1.0kb upstream 3894 true Chr08: 34868011-34871904 Eucalyptus grandis
Eucgr.H02592 1.0kb upstream 1.0kb upstream 1000 false Chr08: 34870905-34871904 Eucalyptus grandis
Eucgr.H02592 1.0kb downstream 1.0kb downstream 3894 true Chr08: 34867011-34870904 Eucalyptus grandis
Eucgr.H02592 1.0kb downstream 1.0kb downstream 1000 false Chr08: 34867011-34868010 Eucalyptus grandis
Eucgr.H02592 2.0kb upstream 2.0kb upstream 4894 true Chr08: 34868011-34872904 Eucalyptus grandis
Eucgr.H02592 2.0kb upstream 2.0kb upstream 2000 false Chr08: 34870905-34872904 Eucalyptus grandis
Eucgr.H02592 2.0kb downstream 2.0kb downstream 4894 true Chr08: 34866011-34870904 Eucalyptus grandis
Eucgr.H02592 2.0kb downstream 2.0kb downstream 2000 false Chr08: 34866011-34868010 Eucalyptus grandis
Eucgr.H02592 5.0kb upstream 5.0kb upstream 7894 true Chr08: 34868011-34875904 Eucalyptus grandis
Eucgr.H02592 5.0kb upstream 5.0kb upstream 5000 false Chr08: 34870905-34875904 Eucalyptus grandis
Eucgr.H02592 5.0kb downstream 5.0kb downstream 7894 true Chr08: 34863011-34870904 Eucalyptus grandis
Eucgr.H02592 5.0kb downstream 5.0kb downstream 5000 false Chr08: 34863011-34868010 Eucalyptus grandis
Eucgr.H02592 10.0kb upstream 10.0kb upstream 12894 true Chr08: 34868011-34880904 Eucalyptus grandis
Eucgr.H02592 10.0kb upstream 10.0kb upstream 10000 false Chr08: 34870905-34880904 Eucalyptus grandis
Eucgr.H02592 10.0kb downstream 10.0kb downstream 12894 true Chr08: 34858011-34870904 Eucalyptus grandis
Eucgr.H02592 10.0kb downstream 10.0kb downstream 10000 false Chr08: 34858011-34868010 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065936 5270 Rosid View MSA
123740982 5271 Pentapetalae View MSA
122787214 5272 Eudicot View MSA
122048350 5273 Angiosperm View MSA
123428873 5275 Viridiplantae View MSA
121310937 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.0665 0.0 62.1014 High  
cufflinks 38.2067 0.0 85.0428    
cufflinks 47.5473 0.0 106.637 High High
cufflinks 26.5442 0.0 58.7213    
cufflinks 38.1995 0.0 84.9805 High  
cufflinks 19.6123 0.0 43.4427   Low

0 Strain