Gene : Eucgr.H02590 E. grandis v2.0
Defline:  (1 of 2) PF00578//PF07649//PF13905 - AhpC/TSA family (AhpC-TSA) // C1-like domain (C1_3) // Thioredoxin-like (Thioredoxin_8) Genomic Order:  2011
Name:  ? Eucgr.H02590 Secondary Identifier:  ? PAC:32041124
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02590 0.5kb upstream 0.5kb upstream 3534 true Chr08: 34838381-34841914 Eucalyptus grandis
Eucgr.H02590 0.5kb upstream 0.5kb upstream 500 false Chr08: 34841415-34841914 Eucalyptus grandis
Eucgr.H02590 0.5kb downstream 0.5kb downstream 3534 true Chr08: 34837881-34841414 Eucalyptus grandis
Eucgr.H02590 0.5kb downstream 0.5kb downstream 500 false Chr08: 34837881-34838380 Eucalyptus grandis
Eucgr.H02590 1.0kb upstream 1.0kb upstream 4034 true Chr08: 34838381-34842414 Eucalyptus grandis
Eucgr.H02590 1.0kb upstream 1.0kb upstream 1000 false Chr08: 34841415-34842414 Eucalyptus grandis
Eucgr.H02590 1.0kb downstream 1.0kb downstream 4034 true Chr08: 34837381-34841414 Eucalyptus grandis
Eucgr.H02590 1.0kb downstream 1.0kb downstream 1000 false Chr08: 34837381-34838380 Eucalyptus grandis
Eucgr.H02590 2.0kb upstream 2.0kb upstream 5034 true Chr08: 34838381-34843414 Eucalyptus grandis
Eucgr.H02590 2.0kb upstream 2.0kb upstream 2000 false Chr08: 34841415-34843414 Eucalyptus grandis
Eucgr.H02590 2.0kb downstream 2.0kb downstream 5034 true Chr08: 34836381-34841414 Eucalyptus grandis
Eucgr.H02590 2.0kb downstream 2.0kb downstream 2000 false Chr08: 34836381-34838380 Eucalyptus grandis
Eucgr.H02590 5.0kb upstream 5.0kb upstream 8034 true Chr08: 34838381-34846414 Eucalyptus grandis
Eucgr.H02590 5.0kb upstream 5.0kb upstream 5000 false Chr08: 34841415-34846414 Eucalyptus grandis
Eucgr.H02590 5.0kb downstream 5.0kb downstream 8034 true Chr08: 34833381-34841414 Eucalyptus grandis
Eucgr.H02590 5.0kb downstream 5.0kb downstream 5000 false Chr08: 34833381-34838380 Eucalyptus grandis
Eucgr.H02590 10.0kb upstream 10.0kb upstream 13034 true Chr08: 34838381-34851414 Eucalyptus grandis
Eucgr.H02590 10.0kb upstream 10.0kb upstream 10000 false Chr08: 34841415-34851414 Eucalyptus grandis
Eucgr.H02590 10.0kb downstream 10.0kb downstream 13034 true Chr08: 34828381-34841414 Eucalyptus grandis
Eucgr.H02590 10.0kb downstream 10.0kb downstream 10000 false Chr08: 34828381-34838380 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065936 5270 Rosid View MSA
123740982 5271 Pentapetalae View MSA
122787214 5272 Eudicot View MSA
122048350 5273 Angiosperm View MSA
123428873 5275 Viridiplantae View MSA
121310937 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9114 0.0 39.6734    
cufflinks 2.45898 0.0 6.26376   Low
cufflinks 21.9956 0.0 48.6417    
cufflinks 3.91628 0.0 9.49354    
cufflinks 12.3603 0.0 27.6367    
cufflinks 27.5097 0.0 60.8947    

0 Strain