Gene : Eucgr.H02566 E. grandis v2.0
Defline:  (1 of 2) 4.1.3.36 - 1,4-dihydroxy-2-naphthoyl-CoA synthase / o-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) Genomic Order:  1988
Name:  ? Eucgr.H02566 Secondary Identifier:  ? PAC:32045537
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5837 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02566 0.5kb upstream 0.5kb upstream 3985 true Chr08: 34359040-34363024 Eucalyptus grandis
Eucgr.H02566 0.5kb upstream 0.5kb upstream 500 false Chr08: 34359040-34359539 Eucalyptus grandis
Eucgr.H02566 0.5kb downstream 0.5kb downstream 3985 true Chr08: 34359540-34363524 Eucalyptus grandis
Eucgr.H02566 0.5kb downstream 0.5kb downstream 500 false Chr08: 34363025-34363524 Eucalyptus grandis
Eucgr.H02566 1.0kb upstream 1.0kb upstream 4485 true Chr08: 34358540-34363024 Eucalyptus grandis
Eucgr.H02566 1.0kb upstream 1.0kb upstream 1000 false Chr08: 34358540-34359539 Eucalyptus grandis
Eucgr.H02566 1.0kb downstream 1.0kb downstream 4485 true Chr08: 34359540-34364024 Eucalyptus grandis
Eucgr.H02566 1.0kb downstream 1.0kb downstream 1000 false Chr08: 34363025-34364024 Eucalyptus grandis
Eucgr.H02566 2.0kb upstream 2.0kb upstream 5485 true Chr08: 34357540-34363024 Eucalyptus grandis
Eucgr.H02566 2.0kb upstream 2.0kb upstream 2000 false Chr08: 34357540-34359539 Eucalyptus grandis
Eucgr.H02566 2.0kb downstream 2.0kb downstream 5485 true Chr08: 34359540-34365024 Eucalyptus grandis
Eucgr.H02566 2.0kb downstream 2.0kb downstream 2000 false Chr08: 34363025-34365024 Eucalyptus grandis
Eucgr.H02566 5.0kb upstream 5.0kb upstream 8485 true Chr08: 34354540-34363024 Eucalyptus grandis
Eucgr.H02566 5.0kb upstream 5.0kb upstream 5000 false Chr08: 34354540-34359539 Eucalyptus grandis
Eucgr.H02566 5.0kb downstream 5.0kb downstream 8485 true Chr08: 34359540-34368024 Eucalyptus grandis
Eucgr.H02566 5.0kb downstream 5.0kb downstream 5000 false Chr08: 34363025-34368024 Eucalyptus grandis
Eucgr.H02566 10.0kb upstream 10.0kb upstream 13485 true Chr08: 34349540-34363024 Eucalyptus grandis
Eucgr.H02566 10.0kb upstream 10.0kb upstream 10000 false Chr08: 34349540-34359539 Eucalyptus grandis
Eucgr.H02566 10.0kb downstream 10.0kb downstream 13485 true Chr08: 34359540-34373024 Eucalyptus grandis
Eucgr.H02566 10.0kb downstream 10.0kb downstream 10000 false Chr08: 34363025-34373024 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066910 5270 Rosid View MSA
123738598 5271 Pentapetalae View MSA
122786230 5272 Eudicot View MSA
122043180 5273 Angiosperm View MSA
121346128 5274 Embryophyte View MSA
123423771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.3195 0.0 8.59621    
cufflinks 0.0839006 0.0 0.353942 Low Low
cufflinks 1.56881 0.0 4.37473    
cufflinks 0.267247 0.0 0.918726 Low  
cufflinks 0.253815 0.0 0.880303 Low  
cufflinks 13.1819 0.0 30.08   High

0 Strain