Gene : Eucgr.H02533 E. grandis v2.0
Defline:  (1 of 3) PTHR23515:SF3 - HIGH AFFINITY NITRATE TRANSPORTER 2.5 Genomic Order:  1958
Name:  ? Eucgr.H02533 Secondary Identifier:  ? PAC:32041415
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02533 0.5kb upstream 0.5kb upstream 3032 true Chr08: 33613952-33616983 Eucalyptus grandis
Eucgr.H02533 0.5kb upstream 0.5kb upstream 500 false Chr08: 33613952-33614451 Eucalyptus grandis
Eucgr.H02533 0.5kb downstream 0.5kb downstream 3032 true Chr08: 33614452-33617483 Eucalyptus grandis
Eucgr.H02533 0.5kb downstream 0.5kb downstream 500 false Chr08: 33616984-33617483 Eucalyptus grandis
Eucgr.H02533 1.0kb upstream 1.0kb upstream 3532 true Chr08: 33613452-33616983 Eucalyptus grandis
Eucgr.H02533 1.0kb upstream 1.0kb upstream 1000 false Chr08: 33613452-33614451 Eucalyptus grandis
Eucgr.H02533 1.0kb downstream 1.0kb downstream 3532 true Chr08: 33614452-33617983 Eucalyptus grandis
Eucgr.H02533 1.0kb downstream 1.0kb downstream 1000 false Chr08: 33616984-33617983 Eucalyptus grandis
Eucgr.H02533 2.0kb upstream 2.0kb upstream 4532 true Chr08: 33612452-33616983 Eucalyptus grandis
Eucgr.H02533 2.0kb upstream 2.0kb upstream 2000 false Chr08: 33612452-33614451 Eucalyptus grandis
Eucgr.H02533 2.0kb downstream 2.0kb downstream 4532 true Chr08: 33614452-33618983 Eucalyptus grandis
Eucgr.H02533 2.0kb downstream 2.0kb downstream 2000 false Chr08: 33616984-33618983 Eucalyptus grandis
Eucgr.H02533 5.0kb upstream 5.0kb upstream 7532 true Chr08: 33609452-33616983 Eucalyptus grandis
Eucgr.H02533 5.0kb upstream 5.0kb upstream 5000 false Chr08: 33609452-33614451 Eucalyptus grandis
Eucgr.H02533 5.0kb downstream 5.0kb downstream 7532 true Chr08: 33614452-33621983 Eucalyptus grandis
Eucgr.H02533 5.0kb downstream 5.0kb downstream 5000 false Chr08: 33616984-33621983 Eucalyptus grandis
Eucgr.H02533 10.0kb upstream 10.0kb upstream 12532 true Chr08: 33604452-33616983 Eucalyptus grandis
Eucgr.H02533 10.0kb upstream 10.0kb upstream 10000 false Chr08: 33604452-33614451 Eucalyptus grandis
Eucgr.H02533 10.0kb downstream 10.0kb downstream 12532 true Chr08: 33614452-33626983 Eucalyptus grandis
Eucgr.H02533 10.0kb downstream 10.0kb downstream 10000 false Chr08: 33616984-33626983 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062413 5270 Rosid View MSA
123749951 5271 Pentapetalae View MSA
122791136 5272 Eudicot View MSA
122049482 5273 Angiosperm View MSA
121311428 5274 Embryophyte View MSA
123426832 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.36708 0.0 6.26643    
cufflinks 10.3786 0.0 24.0053   High
cufflinks 2.87394 0.0 7.50975    
cufflinks 2.8884 0.0 7.54217    
cufflinks 0.286711 0.0 0.97062 Low Low
cufflinks 4.82113 0.0 11.7814    

0 Strain