Gene : Eucgr.H02553 E. grandis v2.0
Defline:  (1 of 3) 3.4.19.3 - Pyroglutamyl-peptidase I / Pyrrolidone-carboxylate peptidase Genomic Order:  1976
Name:  ? Eucgr.H02553 Secondary Identifier:  ? PAC:32040908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02553 0.5kb upstream 0.5kb upstream 4101 true Chr08: 34003549-34007649 Eucalyptus grandis
Eucgr.H02553 0.5kb upstream 0.5kb upstream 500 false Chr08: 34003549-34004048 Eucalyptus grandis
Eucgr.H02553 0.5kb downstream 0.5kb downstream 4101 true Chr08: 34004049-34008149 Eucalyptus grandis
Eucgr.H02553 0.5kb downstream 0.5kb downstream 500 false Chr08: 34007650-34008149 Eucalyptus grandis
Eucgr.H02553 1.0kb upstream 1.0kb upstream 4601 true Chr08: 34003049-34007649 Eucalyptus grandis
Eucgr.H02553 1.0kb upstream 1.0kb upstream 1000 false Chr08: 34003049-34004048 Eucalyptus grandis
Eucgr.H02553 1.0kb downstream 1.0kb downstream 4601 true Chr08: 34004049-34008649 Eucalyptus grandis
Eucgr.H02553 1.0kb downstream 1.0kb downstream 1000 false Chr08: 34007650-34008649 Eucalyptus grandis
Eucgr.H02553 2.0kb upstream 2.0kb upstream 5601 true Chr08: 34002049-34007649 Eucalyptus grandis
Eucgr.H02553 2.0kb upstream 2.0kb upstream 2000 false Chr08: 34002049-34004048 Eucalyptus grandis
Eucgr.H02553 2.0kb downstream 2.0kb downstream 5601 true Chr08: 34004049-34009649 Eucalyptus grandis
Eucgr.H02553 2.0kb downstream 2.0kb downstream 2000 false Chr08: 34007650-34009649 Eucalyptus grandis
Eucgr.H02553 5.0kb upstream 5.0kb upstream 8601 true Chr08: 33999049-34007649 Eucalyptus grandis
Eucgr.H02553 5.0kb upstream 5.0kb upstream 5000 false Chr08: 33999049-34004048 Eucalyptus grandis
Eucgr.H02553 5.0kb downstream 5.0kb downstream 8601 true Chr08: 34004049-34012649 Eucalyptus grandis
Eucgr.H02553 5.0kb downstream 5.0kb downstream 5000 false Chr08: 34007650-34012649 Eucalyptus grandis
Eucgr.H02553 10.0kb upstream 10.0kb upstream 13601 true Chr08: 33994049-34007649 Eucalyptus grandis
Eucgr.H02553 10.0kb upstream 10.0kb upstream 10000 false Chr08: 33994049-34004048 Eucalyptus grandis
Eucgr.H02553 10.0kb downstream 10.0kb downstream 13601 true Chr08: 34004049-34017649 Eucalyptus grandis
Eucgr.H02553 10.0kb downstream 10.0kb downstream 10000 false Chr08: 34007650-34017649 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026217 5273 Angiosperm View MSA
124062104 5270 Rosid View MSA
123741081 5271 Pentapetalae View MSA
122790399 5272 Eudicot View MSA
121348835 5274 Embryophyte View MSA
123428644 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8172 0.0 34.7904    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 10.4661 0.0 29.3706    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.86719 0.0 19.8321   Low

0 Strain