Gene : Eucgr.H02501 E. grandis v2.0
Defline:  (1 of 79) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) Genomic Order:  1931
Name:  ? Eucgr.H02501 Secondary Identifier:  ? PAC:32044922
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02501 0.5kb upstream 0.5kb upstream 8423 true Chr08: 33148024-33156446 Eucalyptus grandis
Eucgr.H02501 0.5kb upstream 0.5kb upstream 500 false Chr08: 33155947-33156446 Eucalyptus grandis
Eucgr.H02501 0.5kb downstream 0.5kb downstream 8423 true Chr08: 33147524-33155946 Eucalyptus grandis
Eucgr.H02501 0.5kb downstream 0.5kb downstream 500 false Chr08: 33147524-33148023 Eucalyptus grandis
Eucgr.H02501 1.0kb upstream 1.0kb upstream 8923 true Chr08: 33148024-33156946 Eucalyptus grandis
Eucgr.H02501 1.0kb upstream 1.0kb upstream 1000 false Chr08: 33155947-33156946 Eucalyptus grandis
Eucgr.H02501 1.0kb downstream 1.0kb downstream 8923 true Chr08: 33147024-33155946 Eucalyptus grandis
Eucgr.H02501 1.0kb downstream 1.0kb downstream 1000 false Chr08: 33147024-33148023 Eucalyptus grandis
Eucgr.H02501 2.0kb upstream 2.0kb upstream 9923 true Chr08: 33148024-33157946 Eucalyptus grandis
Eucgr.H02501 2.0kb upstream 2.0kb upstream 2000 false Chr08: 33155947-33157946 Eucalyptus grandis
Eucgr.H02501 2.0kb downstream 2.0kb downstream 9923 true Chr08: 33146024-33155946 Eucalyptus grandis
Eucgr.H02501 2.0kb downstream 2.0kb downstream 2000 false Chr08: 33146024-33148023 Eucalyptus grandis
Eucgr.H02501 5.0kb upstream 5.0kb upstream 12923 true Chr08: 33148024-33160946 Eucalyptus grandis
Eucgr.H02501 5.0kb upstream 5.0kb upstream 5000 false Chr08: 33155947-33160946 Eucalyptus grandis
Eucgr.H02501 5.0kb downstream 5.0kb downstream 12923 true Chr08: 33143024-33155946 Eucalyptus grandis
Eucgr.H02501 5.0kb downstream 5.0kb downstream 5000 false Chr08: 33143024-33148023 Eucalyptus grandis
Eucgr.H02501 10.0kb upstream 10.0kb upstream 17923 true Chr08: 33148024-33165946 Eucalyptus grandis
Eucgr.H02501 10.0kb upstream 10.0kb upstream 10000 false Chr08: 33155947-33165946 Eucalyptus grandis
Eucgr.H02501 10.0kb downstream 10.0kb downstream 17923 true Chr08: 33138024-33155946 Eucalyptus grandis
Eucgr.H02501 10.0kb downstream 10.0kb downstream 10000 false Chr08: 33138024-33148023 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063192 5270 Rosid View MSA
123743062 5271 Pentapetalae View MSA
122793644 5272 Eudicot View MSA
122046260 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346944 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.67051 0.0 13.2486    
cufflinks 2.67757 0.0 7.1983    
cufflinks 4.67823 0.0 14.8624    
cufflinks 2.25876 0.0 5.93083    
cufflinks 1.80192 0.0 4.99226   Low
cufflinks 10.2793 0.0 23.7786   High

0 Strain