Gene : Eucgr.H03537 E. grandis v2.0
Defline:  (1 of 1) PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Genomic Order:  2637
Name:  ? Eucgr.H03537 Secondary Identifier:  ? PAC:32044729
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03537 0.5kb upstream 0.5kb upstream 7697 true Chr08: 48831531-48839227 Eucalyptus grandis
Eucgr.H03537 0.5kb upstream 0.5kb upstream 500 false Chr08: 48838728-48839227 Eucalyptus grandis
Eucgr.H03537 0.5kb downstream 0.5kb downstream 7697 true Chr08: 48831031-48838727 Eucalyptus grandis
Eucgr.H03537 0.5kb downstream 0.5kb downstream 500 false Chr08: 48831031-48831530 Eucalyptus grandis
Eucgr.H03537 1.0kb upstream 1.0kb upstream 8197 true Chr08: 48831531-48839727 Eucalyptus grandis
Eucgr.H03537 1.0kb upstream 1.0kb upstream 1000 false Chr08: 48838728-48839727 Eucalyptus grandis
Eucgr.H03537 1.0kb downstream 1.0kb downstream 8197 true Chr08: 48830531-48838727 Eucalyptus grandis
Eucgr.H03537 1.0kb downstream 1.0kb downstream 1000 false Chr08: 48830531-48831530 Eucalyptus grandis
Eucgr.H03537 2.0kb upstream 2.0kb upstream 9197 true Chr08: 48831531-48840727 Eucalyptus grandis
Eucgr.H03537 2.0kb upstream 2.0kb upstream 2000 false Chr08: 48838728-48840727 Eucalyptus grandis
Eucgr.H03537 2.0kb downstream 2.0kb downstream 9197 true Chr08: 48829531-48838727 Eucalyptus grandis
Eucgr.H03537 2.0kb downstream 2.0kb downstream 2000 false Chr08: 48829531-48831530 Eucalyptus grandis
Eucgr.H03537 5.0kb upstream 5.0kb upstream 12197 true Chr08: 48831531-48843727 Eucalyptus grandis
Eucgr.H03537 5.0kb upstream 5.0kb upstream 5000 false Chr08: 48838728-48843727 Eucalyptus grandis
Eucgr.H03537 5.0kb downstream 5.0kb downstream 12197 true Chr08: 48826531-48838727 Eucalyptus grandis
Eucgr.H03537 5.0kb downstream 5.0kb downstream 5000 false Chr08: 48826531-48831530 Eucalyptus grandis
Eucgr.H03537 10.0kb upstream 10.0kb upstream 17197 true Chr08: 48831531-48848727 Eucalyptus grandis
Eucgr.H03537 10.0kb upstream 10.0kb upstream 10000 false Chr08: 48838728-48848727 Eucalyptus grandis
Eucgr.H03537 10.0kb downstream 10.0kb downstream 17197 true Chr08: 48821531-48838727 Eucalyptus grandis
Eucgr.H03537 10.0kb downstream 10.0kb downstream 10000 false Chr08: 48821531-48831530 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068885 5270 Rosid View MSA
123740436 5271 Pentapetalae View MSA
122788537 5272 Eudicot View MSA
122049796 5273 Angiosperm View MSA
121350697 5274 Embryophyte View MSA
123381850 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.2577 0.0 129.134 High High
cufflinks 39.2192 0.0 104.469 High  
cufflinks 25.2873 0.0 69.6537    
cufflinks 25.9569 0.0 69.7902 High  
cufflinks 14.0363 0.0 36.7073    
cufflinks 8.94801 0.0 22.5592   Low

0 Strain