Gene : Eucgr.H03532 E. grandis v2.0
Defline:  (1 of 1) PTHR12725//PTHR12725:SF81 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  2632
Name:  ? Eucgr.H03532 Secondary Identifier:  ? PAC:32042788
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7204 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03532 0.5kb upstream 0.5kb upstream 1777 true Chr08: 48784380-48786156 Eucalyptus grandis
Eucgr.H03532 0.5kb upstream 0.5kb upstream 500 false Chr08: 48784380-48784879 Eucalyptus grandis
Eucgr.H03532 0.5kb downstream 0.5kb downstream 1777 true Chr08: 48784880-48786656 Eucalyptus grandis
Eucgr.H03532 0.5kb downstream 0.5kb downstream 500 false Chr08: 48786157-48786656 Eucalyptus grandis
Eucgr.H03532 1.0kb upstream 1.0kb upstream 2277 true Chr08: 48783880-48786156 Eucalyptus grandis
Eucgr.H03532 1.0kb upstream 1.0kb upstream 1000 false Chr08: 48783880-48784879 Eucalyptus grandis
Eucgr.H03532 1.0kb downstream 1.0kb downstream 2277 true Chr08: 48784880-48787156 Eucalyptus grandis
Eucgr.H03532 1.0kb downstream 1.0kb downstream 1000 false Chr08: 48786157-48787156 Eucalyptus grandis
Eucgr.H03532 2.0kb upstream 2.0kb upstream 3277 true Chr08: 48782880-48786156 Eucalyptus grandis
Eucgr.H03532 2.0kb upstream 2.0kb upstream 2000 false Chr08: 48782880-48784879 Eucalyptus grandis
Eucgr.H03532 2.0kb downstream 2.0kb downstream 3277 true Chr08: 48784880-48788156 Eucalyptus grandis
Eucgr.H03532 2.0kb downstream 2.0kb downstream 2000 false Chr08: 48786157-48788156 Eucalyptus grandis
Eucgr.H03532 5.0kb upstream 5.0kb upstream 6277 true Chr08: 48779880-48786156 Eucalyptus grandis
Eucgr.H03532 5.0kb upstream 5.0kb upstream 5000 false Chr08: 48779880-48784879 Eucalyptus grandis
Eucgr.H03532 5.0kb downstream 5.0kb downstream 6277 true Chr08: 48784880-48791156 Eucalyptus grandis
Eucgr.H03532 5.0kb downstream 5.0kb downstream 5000 false Chr08: 48786157-48791156 Eucalyptus grandis
Eucgr.H03532 10.0kb upstream 10.0kb upstream 11277 true Chr08: 48774880-48786156 Eucalyptus grandis
Eucgr.H03532 10.0kb upstream 10.0kb upstream 10000 false Chr08: 48774880-48784879 Eucalyptus grandis
Eucgr.H03532 10.0kb downstream 10.0kb downstream 11277 true Chr08: 48784880-48796156 Eucalyptus grandis
Eucgr.H03532 10.0kb downstream 10.0kb downstream 10000 false Chr08: 48786157-48796156 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062962 5270 Rosid View MSA
123740146 5271 Pentapetalae View MSA
122790968 5272 Eudicot View MSA
122048898 5273 Angiosperm View MSA
121311158 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 163.943 0.0 362.829 High High
cufflinks 22.8232 0.0 56.2709   Low
cufflinks 176.98 0.0 391.618 High High
cufflinks 25.789 0.0 63.403    
cufflinks 51.8344 0.0 118.928 High  
cufflinks 56.6917 0.0 128.25 High  

0 Strain