Gene : Eucgr.H03480 E. grandis v2.0
Defline:  (1 of 1) PTHR31791:SF2 - FRIGIDA-LIKE PROTEIN 4A-RELATED Genomic Order:  2596
Name:  ? Eucgr.H03480 Secondary Identifier:  ? PAC:32043574
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03480 0.5kb upstream 0.5kb upstream 4895 true Chr08: 47688593-47693487 Eucalyptus grandis
Eucgr.H03480 0.5kb upstream 0.5kb upstream 500 false Chr08: 47692988-47693487 Eucalyptus grandis
Eucgr.H03480 0.5kb downstream 0.5kb downstream 4895 true Chr08: 47688093-47692987 Eucalyptus grandis
Eucgr.H03480 0.5kb downstream 0.5kb downstream 500 false Chr08: 47688093-47688592 Eucalyptus grandis
Eucgr.H03480 1.0kb upstream 1.0kb upstream 5395 true Chr08: 47688593-47693987 Eucalyptus grandis
Eucgr.H03480 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47692988-47693987 Eucalyptus grandis
Eucgr.H03480 1.0kb downstream 1.0kb downstream 5395 true Chr08: 47687593-47692987 Eucalyptus grandis
Eucgr.H03480 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47687593-47688592 Eucalyptus grandis
Eucgr.H03480 2.0kb upstream 2.0kb upstream 6395 true Chr08: 47688593-47694987 Eucalyptus grandis
Eucgr.H03480 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47692988-47694987 Eucalyptus grandis
Eucgr.H03480 2.0kb downstream 2.0kb downstream 6395 true Chr08: 47686593-47692987 Eucalyptus grandis
Eucgr.H03480 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47686593-47688592 Eucalyptus grandis
Eucgr.H03480 5.0kb upstream 5.0kb upstream 9395 true Chr08: 47688593-47697987 Eucalyptus grandis
Eucgr.H03480 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47692988-47697987 Eucalyptus grandis
Eucgr.H03480 5.0kb downstream 5.0kb downstream 9395 true Chr08: 47683593-47692987 Eucalyptus grandis
Eucgr.H03480 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47683593-47688592 Eucalyptus grandis
Eucgr.H03480 10.0kb upstream 10.0kb upstream 14395 true Chr08: 47688593-47702987 Eucalyptus grandis
Eucgr.H03480 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47692988-47702987 Eucalyptus grandis
Eucgr.H03480 10.0kb downstream 10.0kb downstream 14395 true Chr08: 47678593-47692987 Eucalyptus grandis
Eucgr.H03480 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47678593-47688592 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064726 5270 Rosid View MSA
123738104 5271 Pentapetalae View MSA
122790313 5272 Eudicot View MSA
122044909 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 83.0553 0.0 196.121 High  
cufflinks 71.6276 0.0 197.51 High  
cufflinks 87.4559 0.0 206.816 High  
cufflinks 65.5135 0.0 183.336 High  
cufflinks 91.785 0.0 266.981 High  
cufflinks 47.4264 0.0 107.87 High Low

0 Strain