Gene : Eucgr.H03367 E. grandis v2.0
Defline:  (1 of 2) KOG3368 - Transport protein particle (TRAPP) complex subunit Genomic Order:  3591
Name:  ? Eucgr.H03367 Secondary Identifier:  ? PAC:32043802
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03367 0.5kb upstream 0.5kb upstream 3392 true Chr08: 64232922-64236313 Eucalyptus grandis
Eucgr.H03367 0.5kb upstream 0.5kb upstream 500 false Chr08: 64232922-64233421 Eucalyptus grandis
Eucgr.H03367 0.5kb downstream 0.5kb downstream 3392 true Chr08: 64233422-64236813 Eucalyptus grandis
Eucgr.H03367 0.5kb downstream 0.5kb downstream 500 false Chr08: 64236314-64236813 Eucalyptus grandis
Eucgr.H03367 1.0kb upstream 1.0kb upstream 3892 true Chr08: 64232422-64236313 Eucalyptus grandis
Eucgr.H03367 1.0kb upstream 1.0kb upstream 1000 false Chr08: 64232422-64233421 Eucalyptus grandis
Eucgr.H03367 1.0kb downstream 1.0kb downstream 3892 true Chr08: 64233422-64237313 Eucalyptus grandis
Eucgr.H03367 1.0kb downstream 1.0kb downstream 1000 false Chr08: 64236314-64237313 Eucalyptus grandis
Eucgr.H03367 2.0kb upstream 2.0kb upstream 4892 true Chr08: 64231422-64236313 Eucalyptus grandis
Eucgr.H03367 2.0kb upstream 2.0kb upstream 2000 false Chr08: 64231422-64233421 Eucalyptus grandis
Eucgr.H03367 2.0kb downstream 2.0kb downstream 4892 true Chr08: 64233422-64238313 Eucalyptus grandis
Eucgr.H03367 2.0kb downstream 2.0kb downstream 2000 false Chr08: 64236314-64238313 Eucalyptus grandis
Eucgr.H03367 5.0kb upstream 5.0kb upstream 7892 true Chr08: 64228422-64236313 Eucalyptus grandis
Eucgr.H03367 5.0kb upstream 5.0kb upstream 5000 false Chr08: 64228422-64233421 Eucalyptus grandis
Eucgr.H03367 5.0kb downstream 5.0kb downstream 7892 true Chr08: 64233422-64241313 Eucalyptus grandis
Eucgr.H03367 5.0kb downstream 5.0kb downstream 5000 false Chr08: 64236314-64241313 Eucalyptus grandis
Eucgr.H03367 10.0kb upstream 10.0kb upstream 12892 true Chr08: 64223422-64236313 Eucalyptus grandis
Eucgr.H03367 10.0kb upstream 10.0kb upstream 10000 false Chr08: 64223422-64233421 Eucalyptus grandis
Eucgr.H03367 10.0kb downstream 10.0kb downstream 12892 true Chr08: 64233422-64246313 Eucalyptus grandis
Eucgr.H03367 10.0kb downstream 10.0kb downstream 10000 false Chr08: 64236314-64246313 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026490 5273 Angiosperm View MSA
124068318 5270 Rosid View MSA
123752439 5271 Pentapetalae View MSA
122794769 5272 Eudicot View MSA
121344291 5274 Embryophyte View MSA
123427363 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5445 0.0 30.1965    
cufflinks 43.2922 0.0 96.0967 High  
cufflinks 15.0312 0.0 35.6273    
cufflinks 43.3605 0.0 96.311 High  
cufflinks 36.5856 0.0 81.6547    
cufflinks 8.71283 0.0 21.721   Low

0 Strain