Gene : Eucgr.H03302 E. grandis v2.0
Defline:  (1 of 1) PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 Genomic Order:  3533
Name:  ? Eucgr.H03302 Secondary Identifier:  ? PAC:32044971
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03302 0.5kb upstream 0.5kb upstream 16889 true Chr08: 63314453-63331341 Eucalyptus grandis
Eucgr.H03302 0.5kb upstream 0.5kb upstream 500 false Chr08: 63330842-63331341 Eucalyptus grandis
Eucgr.H03302 0.5kb downstream 0.5kb downstream 16889 true Chr08: 63313953-63330841 Eucalyptus grandis
Eucgr.H03302 0.5kb downstream 0.5kb downstream 500 false Chr08: 63313953-63314452 Eucalyptus grandis
Eucgr.H03302 1.0kb upstream 1.0kb upstream 17389 true Chr08: 63314453-63331841 Eucalyptus grandis
Eucgr.H03302 1.0kb upstream 1.0kb upstream 1000 false Chr08: 63330842-63331841 Eucalyptus grandis
Eucgr.H03302 1.0kb downstream 1.0kb downstream 17389 true Chr08: 63313453-63330841 Eucalyptus grandis
Eucgr.H03302 1.0kb downstream 1.0kb downstream 1000 false Chr08: 63313453-63314452 Eucalyptus grandis
Eucgr.H03302 2.0kb upstream 2.0kb upstream 18389 true Chr08: 63314453-63332841 Eucalyptus grandis
Eucgr.H03302 2.0kb upstream 2.0kb upstream 2000 false Chr08: 63330842-63332841 Eucalyptus grandis
Eucgr.H03302 2.0kb downstream 2.0kb downstream 18389 true Chr08: 63312453-63330841 Eucalyptus grandis
Eucgr.H03302 2.0kb downstream 2.0kb downstream 2000 false Chr08: 63312453-63314452 Eucalyptus grandis
Eucgr.H03302 5.0kb upstream 5.0kb upstream 21389 true Chr08: 63314453-63335841 Eucalyptus grandis
Eucgr.H03302 5.0kb upstream 5.0kb upstream 5000 false Chr08: 63330842-63335841 Eucalyptus grandis
Eucgr.H03302 5.0kb downstream 5.0kb downstream 21389 true Chr08: 63309453-63330841 Eucalyptus grandis
Eucgr.H03302 5.0kb downstream 5.0kb downstream 5000 false Chr08: 63309453-63314452 Eucalyptus grandis
Eucgr.H03302 10.0kb upstream 10.0kb upstream 26389 true Chr08: 63314453-63340841 Eucalyptus grandis
Eucgr.H03302 10.0kb upstream 10.0kb upstream 10000 false Chr08: 63330842-63340841 Eucalyptus grandis
Eucgr.H03302 10.0kb downstream 10.0kb downstream 26389 true Chr08: 63304453-63330841 Eucalyptus grandis
Eucgr.H03302 10.0kb downstream 10.0kb downstream 10000 false Chr08: 63304453-63314452 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061821 5270 Rosid View MSA
123738220 5271 Pentapetalae View MSA
122791957 5272 Eudicot View MSA
122045545 5273 Angiosperm View MSA
121344025 5274 Embryophyte View MSA
123424859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.71964 0.0 25.2268    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.69616 0.0 16.9258    
cufflinks 0.384717 0.0 1.23678 Low Low
cufflinks 0.45331 0.0 1.43909 Low Low
cufflinks 24.5317 0.0 57.1911   High

0 Strain