Gene : Eucgr.H03280 E. grandis v2.0
Defline:  (1 of 1) PTHR13058 - THREE PRIME REPAIR EXONUCLEASE 1, 2 Genomic Order:  3512
Name:  ? Eucgr.H03280 Secondary Identifier:  ? PAC:32044720
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03280 0.5kb upstream 0.5kb upstream 4477 true Chr08: 63129101-63133577 Eucalyptus grandis
Eucgr.H03280 0.5kb upstream 0.5kb upstream 500 false Chr08: 63133078-63133577 Eucalyptus grandis
Eucgr.H03280 0.5kb downstream 0.5kb downstream 4477 true Chr08: 63128601-63133077 Eucalyptus grandis
Eucgr.H03280 0.5kb downstream 0.5kb downstream 500 false Chr08: 63128601-63129100 Eucalyptus grandis
Eucgr.H03280 1.0kb upstream 1.0kb upstream 4977 true Chr08: 63129101-63134077 Eucalyptus grandis
Eucgr.H03280 1.0kb upstream 1.0kb upstream 1000 false Chr08: 63133078-63134077 Eucalyptus grandis
Eucgr.H03280 1.0kb downstream 1.0kb downstream 4977 true Chr08: 63128101-63133077 Eucalyptus grandis
Eucgr.H03280 1.0kb downstream 1.0kb downstream 1000 false Chr08: 63128101-63129100 Eucalyptus grandis
Eucgr.H03280 2.0kb upstream 2.0kb upstream 5977 true Chr08: 63129101-63135077 Eucalyptus grandis
Eucgr.H03280 2.0kb upstream 2.0kb upstream 2000 false Chr08: 63133078-63135077 Eucalyptus grandis
Eucgr.H03280 2.0kb downstream 2.0kb downstream 5977 true Chr08: 63127101-63133077 Eucalyptus grandis
Eucgr.H03280 2.0kb downstream 2.0kb downstream 2000 false Chr08: 63127101-63129100 Eucalyptus grandis
Eucgr.H03280 5.0kb upstream 5.0kb upstream 8977 true Chr08: 63129101-63138077 Eucalyptus grandis
Eucgr.H03280 5.0kb upstream 5.0kb upstream 5000 false Chr08: 63133078-63138077 Eucalyptus grandis
Eucgr.H03280 5.0kb downstream 5.0kb downstream 8977 true Chr08: 63124101-63133077 Eucalyptus grandis
Eucgr.H03280 5.0kb downstream 5.0kb downstream 5000 false Chr08: 63124101-63129100 Eucalyptus grandis
Eucgr.H03280 10.0kb upstream 10.0kb upstream 13977 true Chr08: 63129101-63143077 Eucalyptus grandis
Eucgr.H03280 10.0kb upstream 10.0kb upstream 10000 false Chr08: 63133078-63143077 Eucalyptus grandis
Eucgr.H03280 10.0kb downstream 10.0kb downstream 13977 true Chr08: 63119101-63133077 Eucalyptus grandis
Eucgr.H03280 10.0kb downstream 10.0kb downstream 10000 false Chr08: 63119101-63129100 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060599 5270 Rosid View MSA
123737222 5271 Pentapetalae View MSA
122794148 5272 Eudicot View MSA
122047735 5273 Angiosperm View MSA
121310783 5274 Embryophyte View MSA
123348185 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.97359 0.0 5.39433    
cufflinks 12.2366 0.0 27.9844   High
cufflinks 2.39701 0.0 6.41132    
cufflinks 3.12507 0.0 8.12518    
cufflinks 3.35019 0.0 8.65874    
cufflinks 4.54098 0.0 11.52    

0 Strain