Gene : Eucgr.H03015 E. grandis v2.0
Defline:  (1 of 2) PTHR11266:SF15 - PEROXISOMAL MEMBRANE PROTEIN PMP22 Genomic Order:  2357
Name:  ? Eucgr.H03015 Secondary Identifier:  ? PAC:32042032
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03015 0.5kb upstream 0.5kb upstream 4285 true Chr08: 42694102-42698386 Eucalyptus grandis
Eucgr.H03015 0.5kb upstream 0.5kb upstream 500 false Chr08: 42697887-42698386 Eucalyptus grandis
Eucgr.H03015 0.5kb downstream 0.5kb downstream 4285 true Chr08: 42693602-42697886 Eucalyptus grandis
Eucgr.H03015 0.5kb downstream 0.5kb downstream 500 false Chr08: 42693602-42694101 Eucalyptus grandis
Eucgr.H03015 1.0kb upstream 1.0kb upstream 4785 true Chr08: 42694102-42698886 Eucalyptus grandis
Eucgr.H03015 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42697887-42698886 Eucalyptus grandis
Eucgr.H03015 1.0kb downstream 1.0kb downstream 4785 true Chr08: 42693102-42697886 Eucalyptus grandis
Eucgr.H03015 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42693102-42694101 Eucalyptus grandis
Eucgr.H03015 2.0kb upstream 2.0kb upstream 5785 true Chr08: 42694102-42699886 Eucalyptus grandis
Eucgr.H03015 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42697887-42699886 Eucalyptus grandis
Eucgr.H03015 2.0kb downstream 2.0kb downstream 5785 true Chr08: 42692102-42697886 Eucalyptus grandis
Eucgr.H03015 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42692102-42694101 Eucalyptus grandis
Eucgr.H03015 5.0kb upstream 5.0kb upstream 8785 true Chr08: 42694102-42702886 Eucalyptus grandis
Eucgr.H03015 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42697887-42702886 Eucalyptus grandis
Eucgr.H03015 5.0kb downstream 5.0kb downstream 8785 true Chr08: 42689102-42697886 Eucalyptus grandis
Eucgr.H03015 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42689102-42694101 Eucalyptus grandis
Eucgr.H03015 10.0kb upstream 10.0kb upstream 13785 true Chr08: 42694102-42707886 Eucalyptus grandis
Eucgr.H03015 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42697887-42707886 Eucalyptus grandis
Eucgr.H03015 10.0kb downstream 10.0kb downstream 13785 true Chr08: 42684102-42697886 Eucalyptus grandis
Eucgr.H03015 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42684102-42694101 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064630 5270 Rosid View MSA
123740059 5271 Pentapetalae View MSA
122795026 5272 Eudicot View MSA
122043631 5273 Angiosperm View MSA
121345972 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8526 0.0 36.1599    
cufflinks 17.4612 0.0 39.591    
cufflinks 19.1824 0.0 43.2551    
cufflinks 25.2811 0.0 56.3077   High
cufflinks 14.5694 0.0 33.4278    
cufflinks 8.36585 0.0 20.1572   Low

0 Strain