Gene : Eucgr.H02975 E. grandis v2.0
Defline:  (1 of 4) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  2328
Name:  ? Eucgr.H02975 Secondary Identifier:  ? PAC:32042059
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4942 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02975 0.5kb upstream 0.5kb upstream 10318 true Chr08: 41967605-41977922 Eucalyptus grandis
Eucgr.H02975 0.5kb upstream 0.5kb upstream 500 false Chr08: 41977423-41977922 Eucalyptus grandis
Eucgr.H02975 0.5kb downstream 0.5kb downstream 10318 true Chr08: 41967105-41977422 Eucalyptus grandis
Eucgr.H02975 0.5kb downstream 0.5kb downstream 500 false Chr08: 41967105-41967604 Eucalyptus grandis
Eucgr.H02975 1.0kb upstream 1.0kb upstream 10818 true Chr08: 41967605-41978422 Eucalyptus grandis
Eucgr.H02975 1.0kb upstream 1.0kb upstream 1000 false Chr08: 41977423-41978422 Eucalyptus grandis
Eucgr.H02975 1.0kb downstream 1.0kb downstream 10818 true Chr08: 41966605-41977422 Eucalyptus grandis
Eucgr.H02975 1.0kb downstream 1.0kb downstream 1000 false Chr08: 41966605-41967604 Eucalyptus grandis
Eucgr.H02975 2.0kb upstream 2.0kb upstream 11818 true Chr08: 41967605-41979422 Eucalyptus grandis
Eucgr.H02975 2.0kb upstream 2.0kb upstream 2000 false Chr08: 41977423-41979422 Eucalyptus grandis
Eucgr.H02975 2.0kb downstream 2.0kb downstream 11818 true Chr08: 41965605-41977422 Eucalyptus grandis
Eucgr.H02975 2.0kb downstream 2.0kb downstream 2000 false Chr08: 41965605-41967604 Eucalyptus grandis
Eucgr.H02975 5.0kb upstream 5.0kb upstream 14818 true Chr08: 41967605-41982422 Eucalyptus grandis
Eucgr.H02975 5.0kb upstream 5.0kb upstream 5000 false Chr08: 41977423-41982422 Eucalyptus grandis
Eucgr.H02975 5.0kb downstream 5.0kb downstream 14818 true Chr08: 41962605-41977422 Eucalyptus grandis
Eucgr.H02975 5.0kb downstream 5.0kb downstream 5000 false Chr08: 41962605-41967604 Eucalyptus grandis
Eucgr.H02975 10.0kb upstream 10.0kb upstream 19818 true Chr08: 41967605-41987422 Eucalyptus grandis
Eucgr.H02975 10.0kb upstream 10.0kb upstream 10000 false Chr08: 41977423-41987422 Eucalyptus grandis
Eucgr.H02975 10.0kb downstream 10.0kb downstream 19818 true Chr08: 41957605-41977422 Eucalyptus grandis
Eucgr.H02975 10.0kb downstream 10.0kb downstream 10000 false Chr08: 41957605-41967604 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.87832 0.0 11.3329   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.41247 0.0 5.96095    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.2032 0.0 5.54219    

0 Strain