Gene : Eucgr.H02976 E. grandis v2.0
Defline:  (1 of 4) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  2329
Name:  ? Eucgr.H02976 Secondary Identifier:  ? PAC:32040890
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4942 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02976 0.5kb upstream 0.5kb upstream 9685 true Chr08: 42014058-42023742 Eucalyptus grandis
Eucgr.H02976 0.5kb upstream 0.5kb upstream 500 false Chr08: 42023243-42023742 Eucalyptus grandis
Eucgr.H02976 0.5kb downstream 0.5kb downstream 9685 true Chr08: 42013558-42023242 Eucalyptus grandis
Eucgr.H02976 0.5kb downstream 0.5kb downstream 500 false Chr08: 42013558-42014057 Eucalyptus grandis
Eucgr.H02976 1.0kb upstream 1.0kb upstream 10185 true Chr08: 42014058-42024242 Eucalyptus grandis
Eucgr.H02976 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42023243-42024242 Eucalyptus grandis
Eucgr.H02976 1.0kb downstream 1.0kb downstream 10185 true Chr08: 42013058-42023242 Eucalyptus grandis
Eucgr.H02976 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42013058-42014057 Eucalyptus grandis
Eucgr.H02976 2.0kb upstream 2.0kb upstream 11185 true Chr08: 42014058-42025242 Eucalyptus grandis
Eucgr.H02976 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42023243-42025242 Eucalyptus grandis
Eucgr.H02976 2.0kb downstream 2.0kb downstream 11185 true Chr08: 42012058-42023242 Eucalyptus grandis
Eucgr.H02976 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42012058-42014057 Eucalyptus grandis
Eucgr.H02976 5.0kb upstream 5.0kb upstream 14185 true Chr08: 42014058-42028242 Eucalyptus grandis
Eucgr.H02976 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42023243-42028242 Eucalyptus grandis
Eucgr.H02976 5.0kb downstream 5.0kb downstream 14185 true Chr08: 42009058-42023242 Eucalyptus grandis
Eucgr.H02976 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42009058-42014057 Eucalyptus grandis
Eucgr.H02976 10.0kb upstream 10.0kb upstream 19185 true Chr08: 42014058-42033242 Eucalyptus grandis
Eucgr.H02976 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42023243-42033242 Eucalyptus grandis
Eucgr.H02976 10.0kb downstream 10.0kb downstream 19185 true Chr08: 42004058-42023242 Eucalyptus grandis
Eucgr.H02976 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42004058-42014057 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9248 0.0 24.3311    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.51689 0.0 21.2609    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.455 0.0 12.6512   Low

0 Strain