Gene : Eucgr.H02989 E. grandis v2.0
Defline:  (1 of 1) 4.2.1.104 - Cyanase / Cyanate lyase Genomic Order:  2337
Name:  ? Eucgr.H02989 Secondary Identifier:  ? PAC:32044963
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CYANCAT-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02989 0.5kb upstream 0.5kb upstream 3645 true Chr08: 42245521-42249165 Eucalyptus grandis
Eucgr.H02989 0.5kb upstream 0.5kb upstream 500 false Chr08: 42245521-42246020 Eucalyptus grandis
Eucgr.H02989 0.5kb downstream 0.5kb downstream 3645 true Chr08: 42246021-42249665 Eucalyptus grandis
Eucgr.H02989 0.5kb downstream 0.5kb downstream 500 false Chr08: 42249166-42249665 Eucalyptus grandis
Eucgr.H02989 1.0kb upstream 1.0kb upstream 4145 true Chr08: 42245021-42249165 Eucalyptus grandis
Eucgr.H02989 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42245021-42246020 Eucalyptus grandis
Eucgr.H02989 1.0kb downstream 1.0kb downstream 4145 true Chr08: 42246021-42250165 Eucalyptus grandis
Eucgr.H02989 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42249166-42250165 Eucalyptus grandis
Eucgr.H02989 2.0kb upstream 2.0kb upstream 5145 true Chr08: 42244021-42249165 Eucalyptus grandis
Eucgr.H02989 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42244021-42246020 Eucalyptus grandis
Eucgr.H02989 2.0kb downstream 2.0kb downstream 5145 true Chr08: 42246021-42251165 Eucalyptus grandis
Eucgr.H02989 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42249166-42251165 Eucalyptus grandis
Eucgr.H02989 5.0kb upstream 5.0kb upstream 8145 true Chr08: 42241021-42249165 Eucalyptus grandis
Eucgr.H02989 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42241021-42246020 Eucalyptus grandis
Eucgr.H02989 5.0kb downstream 5.0kb downstream 8145 true Chr08: 42246021-42254165 Eucalyptus grandis
Eucgr.H02989 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42249166-42254165 Eucalyptus grandis
Eucgr.H02989 10.0kb upstream 10.0kb upstream 13145 true Chr08: 42236021-42249165 Eucalyptus grandis
Eucgr.H02989 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42236021-42246020 Eucalyptus grandis
Eucgr.H02989 10.0kb downstream 10.0kb downstream 13145 true Chr08: 42246021-42259165 Eucalyptus grandis
Eucgr.H02989 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42249166-42259165 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061762 5270 Rosid View MSA
123751586 5271 Pentapetalae View MSA
122788870 5272 Eudicot View MSA
122044092 5273 Angiosperm View MSA
121346381 5274 Embryophyte View MSA
123424096 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.8758 0.0 45.4783   Low
cufflinks 37.2064 0.0 82.6804    
cufflinks 25.0145 0.0 56.4612    
cufflinks 31.1299 0.0 69.5155    
cufflinks 28.9089 0.0 64.7697    
cufflinks 46.9694 0.0 103.905 High High

0 Strain