Gene : Eucgr.H04042 E. grandis v2.0
Defline:  (1 of 1) PTHR11246//PTHR11246:SF11 - PRE-MRNA SPLICING FACTOR Genomic Order:  3038
Name:  ? Eucgr.H04042 Secondary Identifier:  ? PAC:32041184
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04042 0.5kb upstream 0.5kb upstream 4799 true Chr08: 54922984-54927782 Eucalyptus grandis
Eucgr.H04042 0.5kb upstream 0.5kb upstream 500 false Chr08: 54927283-54927782 Eucalyptus grandis
Eucgr.H04042 0.5kb downstream 0.5kb downstream 4799 true Chr08: 54922484-54927282 Eucalyptus grandis
Eucgr.H04042 0.5kb downstream 0.5kb downstream 500 false Chr08: 54922484-54922983 Eucalyptus grandis
Eucgr.H04042 1.0kb upstream 1.0kb upstream 5299 true Chr08: 54922984-54928282 Eucalyptus grandis
Eucgr.H04042 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54927283-54928282 Eucalyptus grandis
Eucgr.H04042 1.0kb downstream 1.0kb downstream 5299 true Chr08: 54921984-54927282 Eucalyptus grandis
Eucgr.H04042 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54921984-54922983 Eucalyptus grandis
Eucgr.H04042 2.0kb upstream 2.0kb upstream 6299 true Chr08: 54922984-54929282 Eucalyptus grandis
Eucgr.H04042 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54927283-54929282 Eucalyptus grandis
Eucgr.H04042 2.0kb downstream 2.0kb downstream 6299 true Chr08: 54920984-54927282 Eucalyptus grandis
Eucgr.H04042 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54920984-54922983 Eucalyptus grandis
Eucgr.H04042 5.0kb upstream 5.0kb upstream 9299 true Chr08: 54922984-54932282 Eucalyptus grandis
Eucgr.H04042 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54927283-54932282 Eucalyptus grandis
Eucgr.H04042 5.0kb downstream 5.0kb downstream 9299 true Chr08: 54917984-54927282 Eucalyptus grandis
Eucgr.H04042 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54917984-54922983 Eucalyptus grandis
Eucgr.H04042 10.0kb upstream 10.0kb upstream 14299 true Chr08: 54922984-54937282 Eucalyptus grandis
Eucgr.H04042 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54927283-54937282 Eucalyptus grandis
Eucgr.H04042 10.0kb downstream 10.0kb downstream 14299 true Chr08: 54912984-54927282 Eucalyptus grandis
Eucgr.H04042 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54912984-54922983 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068395 5270 Rosid View MSA
123738707 5271 Pentapetalae View MSA
122785733 5272 Eudicot View MSA
122045803 5273 Angiosperm View MSA
121347317 5274 Embryophyte View MSA
123426639 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.01526 0.0 5.28273    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.85251 0.0 8.20679    
cufflinks 0.266175 0.0 1.02465 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.43118 0.0 10.4506    

0 Strain