Gene : Eucgr.H03965 E. grandis v2.0

Defline:  (1 of 152) PF00847 - AP2 domain (AP2) Genomic Order:  2966
Name:  ? Eucgr.H03965 Secondary Identifier:  ? PAC:32043037

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03965 0.5kb upstream 0.5kb upstream 1903 true Chr08: 54311707-54313609 Eucalyptus grandis
Eucgr.H03965 0.5kb upstream 0.5kb upstream 500 false Chr08: 54311707-54312206 Eucalyptus grandis
Eucgr.H03965 0.5kb downstream 0.5kb downstream 1903 true Chr08: 54312207-54314109 Eucalyptus grandis
Eucgr.H03965 0.5kb downstream 0.5kb downstream 500 false Chr08: 54313610-54314109 Eucalyptus grandis
Eucgr.H03965 1.0kb upstream 1.0kb upstream 2403 true Chr08: 54311207-54313609 Eucalyptus grandis
Eucgr.H03965 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54311207-54312206 Eucalyptus grandis
Eucgr.H03965 1.0kb downstream 1.0kb downstream 2403 true Chr08: 54312207-54314609 Eucalyptus grandis
Eucgr.H03965 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54313610-54314609 Eucalyptus grandis
Eucgr.H03965 2.0kb upstream 2.0kb upstream 3403 true Chr08: 54310207-54313609 Eucalyptus grandis
Eucgr.H03965 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54310207-54312206 Eucalyptus grandis
Eucgr.H03965 2.0kb downstream 2.0kb downstream 3403 true Chr08: 54312207-54315609 Eucalyptus grandis
Eucgr.H03965 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54313610-54315609 Eucalyptus grandis
Eucgr.H03965 5.0kb upstream 5.0kb upstream 6403 true Chr08: 54307207-54313609 Eucalyptus grandis
Eucgr.H03965 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54307207-54312206 Eucalyptus grandis
Eucgr.H03965 5.0kb downstream 5.0kb downstream 6403 true Chr08: 54312207-54318609 Eucalyptus grandis
Eucgr.H03965 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54313610-54318609 Eucalyptus grandis
Eucgr.H03965 10.0kb upstream 10.0kb upstream 11403 true Chr08: 54302207-54313609 Eucalyptus grandis
Eucgr.H03965 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54302207-54312206 Eucalyptus grandis
Eucgr.H03965 10.0kb downstream 10.0kb downstream 11403 true Chr08: 54312207-54323609 Eucalyptus grandis
Eucgr.H03965 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54313610-54323609 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065952 5270 Rosid View MSA
123736884 5271 Pentapetalae View MSA
122769881 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58015 0.0 4.68629   Low
cufflinks 17.9386 0.0 42.1207   High
cufflinks 4.46916 0.0 12.0271    
cufflinks 13.9938 0.0 33.7859    
cufflinks 8.02114 0.0 20.3861    
cufflinks 1.42 0.0 4.19834   Low

0 Strain