Gene : Eucgr.H03968 E. grandis v2.0
Defline:  (1 of 2) PTHR13832:SF198 - PROTEIN PHOSPHATASE 2C 34-RELATED Genomic Order:  2969
Name:  ? Eucgr.H03968 Secondary Identifier:  ? PAC:32045125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03968 0.5kb upstream 0.5kb upstream 2352 true Chr08: 54337288-54339639 Eucalyptus grandis
Eucgr.H03968 0.5kb upstream 0.5kb upstream 500 false Chr08: 54337288-54337787 Eucalyptus grandis
Eucgr.H03968 0.5kb downstream 0.5kb downstream 2352 true Chr08: 54337788-54340139 Eucalyptus grandis
Eucgr.H03968 0.5kb downstream 0.5kb downstream 500 false Chr08: 54339640-54340139 Eucalyptus grandis
Eucgr.H03968 1.0kb upstream 1.0kb upstream 2852 true Chr08: 54336788-54339639 Eucalyptus grandis
Eucgr.H03968 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54336788-54337787 Eucalyptus grandis
Eucgr.H03968 1.0kb downstream 1.0kb downstream 2852 true Chr08: 54337788-54340639 Eucalyptus grandis
Eucgr.H03968 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54339640-54340639 Eucalyptus grandis
Eucgr.H03968 2.0kb upstream 2.0kb upstream 3852 true Chr08: 54335788-54339639 Eucalyptus grandis
Eucgr.H03968 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54335788-54337787 Eucalyptus grandis
Eucgr.H03968 2.0kb downstream 2.0kb downstream 3852 true Chr08: 54337788-54341639 Eucalyptus grandis
Eucgr.H03968 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54339640-54341639 Eucalyptus grandis
Eucgr.H03968 5.0kb upstream 5.0kb upstream 6852 true Chr08: 54332788-54339639 Eucalyptus grandis
Eucgr.H03968 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54332788-54337787 Eucalyptus grandis
Eucgr.H03968 5.0kb downstream 5.0kb downstream 6852 true Chr08: 54337788-54344639 Eucalyptus grandis
Eucgr.H03968 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54339640-54344639 Eucalyptus grandis
Eucgr.H03968 10.0kb upstream 10.0kb upstream 11852 true Chr08: 54327788-54339639 Eucalyptus grandis
Eucgr.H03968 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54327788-54337787 Eucalyptus grandis
Eucgr.H03968 10.0kb downstream 10.0kb downstream 11852 true Chr08: 54337788-54349639 Eucalyptus grandis
Eucgr.H03968 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54339640-54349639 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073402 5270 Rosid View MSA
123757338 5271 Pentapetalae View MSA
122797893 5272 Eudicot View MSA
122041990 5273 Angiosperm View MSA
121309911 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.45078 0.0 21.1976    
cufflinks 4.68826 0.0 12.3881    
cufflinks 8.215 0.0 20.6123    
cufflinks 1.67214 0.0 4.90608   Low
cufflinks 5.59325 0.0 14.5912    
cufflinks 13.5182 0.0 32.5717   High

0 Strain